Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M09
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.0  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 422 FTIE-IVCILFFIVGELLSMVIMFFFFNL*SVTDHWRFSSVILFF 291
           FT+  ++C  +F    ++ + + +F++     T H  F   I +F
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -1

Query: 437 MIYFKFTIEIVCILFFIVGELLSMVIMFFFFNL*SVTDHWRFSSVILFF 291
           +I+    + ++CI +F+V     + I +F+      T H  F   I  F
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 483 RSQVVASNFYLNTEW 527
           ++Q++ +N +LN EW
Sbjct: 46  KNQILTTNAWLNLEW 60


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 483 RSQVVASNFYLNTEW 527
           ++Q++ +N +LN EW
Sbjct: 46  KNQILTTNAWLNLEW 60


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 483 RSQVVASNFYLNTEW 527
           ++Q++ +N +LN EW
Sbjct: 46  KNQILTTNAWLNLEW 60


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 127 SDLRPGSEPGQSRGVPAVNTITRLGVPG 44
           +DL  GS+  +S+ +  +N +  LGV G
Sbjct: 172 ADLNQGSDYVRSKIIEYMNHLVDLGVAG 199


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 127 SDLRPGSEPGQSRGVPAVNTITRLGVPG 44
           +DL  GS+  +S+ +  +N +  LGV G
Sbjct: 173 ADLNQGSDYVRSKIIEYMNHLVDLGVAG 200


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 127 SDLRPGSEPGQSRGVPAVNTITRLGVPG 44
           +DL  GS+  +S+ +  +N +  LGV G
Sbjct: 173 ADLNQGSDYVRSKIIEYMNHLVDLGVAG 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,368
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)