Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_M08
(819 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 350 8e-97
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 350 8e-97
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 349 2e-96
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 349 2e-96
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 332 2e-91
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 332 2e-91
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 319 2e-87
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 171 6e-43
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 169 2e-42
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 167 6e-42
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 167 6e-42
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 166 1e-41
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 166 2e-41
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 165 4e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 165 4e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 160 9e-40
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 123 2e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 122 2e-28
At1g69690.1 68414.m08020 TCP family transcription factor, putati... 31 1.2
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.2
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.1
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.7
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 3.7
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 8.6
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 8.6
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 8.6
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 350 bits (860), Expect = 8e-97
Identities = 155/188 (82%), Positives = 172/188 (91%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D + ++DNEAIYDICRR+L IERPTY L+ Q +SS+T
Sbjct: 196 EHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLT 239
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 350 bits (860), Expect = 8e-97
Identities = 155/188 (82%), Positives = 172/188 (91%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D + ++DNEAIYDICRR+L IERPTY L+ Q +SS+T
Sbjct: 196 EHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLT 239
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 349 bits (857), Expect = 2e-96
Identities = 155/188 (82%), Positives = 171/188 (90%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D + ++DNEAIYDICRR+L+IERPTY L+ Q +SS+T
Sbjct: 196 EHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLT 239
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 349 bits (857), Expect = 2e-96
Identities = 155/188 (82%), Positives = 171/188 (90%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D + ++DNEAIYDICRR+L+IERPTY L+ Q +SS+T
Sbjct: 196 EHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLT 239
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 332 bits (816), Expect = 2e-91
Identities = 148/188 (78%), Positives = 166/188 (88%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D A ++DNEAIYDICRR+LDIERPTY LI Q +SS+T
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 332 bits (816), Expect = 2e-91
Identities = 148/188 (78%), Positives = 166/188 (88%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D A ++DNEAIYDICRR+LDIERPTY LI Q +SS+T
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 319 bits (783), Expect = 2e-87
Identities = 140/188 (74%), Positives = 164/188 (87%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
R+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTA
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVEPYNSI 661
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+H+D ++DNEAIYDICRR+LDIERPTY LI Q +SS+T
Sbjct: 196 EHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLT 239
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 171 bits (415), Expect = 6e-43
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 268
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 269 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 448
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 449 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 628
VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Query: 629 STAVVEPYNS 658
S VVEPYN+
Sbjct: 176 SDTVVEPYNA 185
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 169 bits (411), Expect = 2e-42
Identities = 77/187 (41%), Positives = 114/187 (60%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 180 VVEPYNA 186
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 195 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 238
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (407), Expect = 6e-42
Identities = 77/187 (41%), Positives = 112/187 (59%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (407), Expect = 6e-42
Identities = 77/187 (41%), Positives = 112/187 (59%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/187 (40%), Positives = 114/187 (60%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 180 VVEPYNA 186
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 195 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 238
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 166 bits (403), Expect = 2e-41
Identities = 77/187 (41%), Positives = 113/187 (60%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + PT+ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVT 237
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 165 bits (400), Expect = 4e-41
Identities = 76/187 (40%), Positives = 112/187 (59%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 165 bits (400), Expect = 4e-41
Identities = 76/187 (40%), Positives = 114/187 (60%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + P++ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 160 bits (389), Expect = 9e-40
Identities = 75/187 (40%), Positives = 112/187 (59%)
Frame = +2
Query: 98 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 637
+RK A+ LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 638 VVEPYNS 658
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 684 KHSDCAFMVDNEAIYDICRRNLDIERPTYXT*XXLIGQXVSSIT 815
+++D ++DNEA+YDIC R L + PT+ LI +S +T
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVT 237
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 123 bits (296), Expect = 2e-28
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +2
Query: 101 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 280
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 281 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 454
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 455 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVS 631
D I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 632 TAVVEPYNSI 661
VV+PYNS+
Sbjct: 180 DVVVQPYNSL 189
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 122 bits (295), Expect = 2e-28
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +2
Query: 101 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 280
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 281 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 454
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 455 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVS 631
D I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 632 TAVVEPYNSI 661
VV+PYNS+
Sbjct: 180 DVVVQPYNSL 189
>At1g69690.1 68414.m08020 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa]
Length = 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 661 PHHPHNP*STLTVLSWSTMKLSMTSAAVISTLSAQPTQPEXVSSDRXSPR 810
P H H P L +L ST S TS A+IST S ++P+ R S +
Sbjct: 5 PDHNHRPNFPLQLLDSSTSS-SSTSLAIISTTSEPNSEPKKPPPKRTSTK 53
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -3
Query: 535 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 356
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 355 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 221
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 176 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 325
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 267 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 142
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -3
Query: 304 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 134
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 133 G-LANVYRDALTHF 95
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 164 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 331
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 332 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 164 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 331
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 332 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 164 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 331
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 332 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,719,433
Number of Sequences: 28952
Number of extensions: 382192
Number of successful extensions: 1157
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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