Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M07
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.32 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = +3

Query: 408 AVTLKRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELL 587
           A   + +VLGR C LH H   K  T   +     G G  ++  V FL+ T    ++  ++
Sbjct: 567 ATKAQSVVLGRICTLH-HHLSKLVTRFNE---IFGLGLLLMFGVSFLLITQTIFIICVIV 622

Query: 588 SSRLIALNHYI 620
            S  IA  H +
Sbjct: 623 QSEQIAWLHLL 633


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 125 MDDDDYWNTSDTKAKAFS 178
           M DDD W+T  + A AFS
Sbjct: 1   MCDDDDWDTPTSSAPAFS 18


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 261 KMLSSFCPGYVFCPIAKISCGDNTSSSK 178
           K+L +F      CP  K+SCG+     K
Sbjct: 97  KVLPNFKTDEPICPDGKLSCGNGECIDK 124


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 261 KMLSSFCPGYVFCPIAKISCGDNTSSSK 178
           K+L +F      CP  K+SCG+     K
Sbjct: 104 KVLPNFKTDEPICPDGKLSCGNGECIDK 131


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 492 DGAVAIGDGNAI 527
           DG++A GDGN I
Sbjct: 119 DGSLACGDGNCI 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,160
Number of Sequences: 336
Number of extensions: 3104
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)