Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M07
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0089 - 20669197-20669280,20669944-20670030,20670143-206702...    30   2.0  
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543...    29   4.6  
06_02_0324 + 14414422-14414541,14415271-14415347,14415807-144159...    29   4.6  
12_02_0775 - 23049842-23051299                                         29   6.1  

>03_05_0089 -
           20669197-20669280,20669944-20670030,20670143-20670261,
           20670838-20671076,20671159-20671215,20671564-20672195,
           20673172-20673213,20675849-20676133
          Length = 514

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 507 IGDGNAILTVVLFLIATLNKKLVYELLSSRLIALNHYISFLQNEGKITE--LTDXLPCLE 680
           +G GN         + T++  ++  +L+  ++ L +YIS+L  EG++    + D  P L 
Sbjct: 346 LGAGNPKAAYFSVWVVTISCAIISAILAVVILCLRNYISYLFTEGEVVSNAVADLCPLLA 405

Query: 681 GVLMRXG 701
             L+  G
Sbjct: 406 ITLILNG 412


>10_02_0114 +
           5431578-5431724,5432753-5432797,5433572-5433691,
           5433773-5433880,5434900-5435073,5435366-5435503,
           5435879-5435986,5436131-5436238,5436340-5436488,
           5437594-5437747,5437980-5438140,5438221-5438427,
           5438575-5438758,5438846-5438929,5439023-5439222,
           5439314-5439373,5439461-5439665
          Length = 783

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 525 ILTVVLFLIATLNKKLVYELLSSRLIALN-HYISFLQNE 638
           I+  V+FL AT+   LV E LS+ L AL  H++ F QN+
Sbjct: 724 IIGAVIFLFATIGVLLVMETLSAFLHALRLHWVEF-QNK 761


>06_02_0324 +
           14414422-14414541,14415271-14415347,14415807-14415994,
           14416276-14416373,14416633-14416766,14416852-14416953,
           14417931-14418038,14418335-14418465,14420068-14420142,
           14420439-14420518,14421229-14421320,14422333-14422634,
           14422717-14422856
          Length = 548

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 363 KDPAQEQSQESPETVAVTLKRLVLGRRCALHVHRTMKSKTELL 491
           +D AQE+   S   V V L+   +GR+  L  HR+  S ++ L
Sbjct: 451 RDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQAL 493


>12_02_0775 - 23049842-23051299
          Length = 485

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 513 DGNAILTVVLFLIATLNKKLVYELLSSRLIALNHYISFLQNEGKITEL 656
           DG+  L VV+F        L Y  L+ R+ +  H++SF+     I  L
Sbjct: 4   DGSPPLRVVIFPWLAFGHLLPYMELAERMASRGHHVSFVSTPRNIARL 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,821,704
Number of Sequences: 37544
Number of extensions: 323951
Number of successful extensions: 858
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)