Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M07
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55363-6|AAA97964.1|  522|Caenorhabditis elegans Defective sperm...    56   4e-08
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p...    28   9.5  
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ...    28   9.5  
AF016688-1|AAB66077.3|  700|Caenorhabditis elegans Hypothetical ...    28   9.5  
AC025721-7|AAK29911.3|  668|Caenorhabditis elegans Half transpor...    28   9.5  

>U55363-6|AAA97964.1|  522|Caenorhabditis elegans Defective
           spermatogenesis protein39, isoform a protein.
          Length = 522

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = +3

Query: 351 HNQGKDPAQEQSQE--SPETVAVTLKRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNA 524
           H + KD  +    E   P T+  ++KR++ G    L  +R+++ KT+LL  AVA  D N 
Sbjct: 150 HRKLKDQHEVLRHERFQPLTIEASIKRMLQGHTVTLDYYRSLRDKTQLLKQAVATYDNNT 209

Query: 525 ILTVVLFLIATLNKKLVYELLSSRLIALNHYISFLQNEGKITELTDXL 668
           I  +V+FL  TL + +  +++  +  A   Y   LQ  G+  ++   L
Sbjct: 210 IFKIVIFLERTLKENIFCKIMDGQKSACRVYTRHLQITGEWDKMNKFL 257


>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +3

Query: 453  HVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRLIALNHYISFLQ 632
            H H  +KS      GA+A+G+ N  L  +L  I T  KK  Y LL     AL   I +  
Sbjct: 899  HHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKK-QYLLLH----ALKEVIVWES 953

Query: 633  NEGKITELTD 662
            +  + T+ TD
Sbjct: 954  SSEESTKSTD 963


>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +3

Query: 453  HVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRLIALNHYISFLQ 632
            H H  +KS      GA+A+G+ N  L  +L  I T  KK  Y LL     AL   I +  
Sbjct: 899  HHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKK-QYLLLH----ALKEVIVWES 953

Query: 633  NEGKITELTD 662
            +  + T+ TD
Sbjct: 954  SSEESTKSTD 963


>AF016688-1|AAB66077.3|  700|Caenorhabditis elegans Hypothetical
           protein F18A12.5 protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 545 KEHHR*YSIPISYCHSSV*QFSLALHCA 462
           +EHH+ YS  ++    ++ QF+LA  CA
Sbjct: 659 QEHHQHYSFRVNGAFKNMPQFALAFECA 686


>AC025721-7|AAK29911.3|  668|Caenorhabditis elegans Half transporter
           (pgp related)protein 6 protein.
          Length = 668

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 437 TEDQPFQCNCHGLWRFLTLFLGWIFXLIV 351
           TEDQ        LW  +  F GW F  +V
Sbjct: 75  TEDQNASMTAGELWNLIKPFFGWFFAAVV 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,430,302
Number of Sequences: 27780
Number of extensions: 291330
Number of successful extensions: 673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)