Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M06
         (855 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2; ...    50   6e-05
UniRef50_Q94547 Cluster: Regulator of gene activity; n=3; Sophop...    43   0.009
UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:...    39   0.18 
UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia scl...    36   0.98 
UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT t...    36   1.7  
UniRef50_A0DPM4 Cluster: Chromosome undetermined scaffold_59, wh...    33   6.9  
UniRef50_A2RB58 Cluster: Contig An18c0170, complete genome; n=2;...    33   6.9  

>UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2;
           Endopterygota|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 513

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +2

Query: 443 GALSPGRDSTAMPGGAPPSMASRATLFG-QRTFADRRVTMP----TTLSQAXXXXXXXXX 607
           G+    +  ++    A     +R+ LFG QR FADRR  MP    TT+S           
Sbjct: 93  GSQQQSQQLSSTNSSASSGANARSNLFGGQRGFADRRA-MPGLSGTTMSNMVSFMQSRGY 151

Query: 608 XXXRFNAGNNYHSVFGEG-GDTSTQPLLDLSEF 703
                N+ NN+HSVF  G  +T T PLLDLSEF
Sbjct: 152 GSQSGNSINNFHSVFDNGTAETGTPPLLDLSEF 184


>UniRef50_Q94547 Cluster: Regulator of gene activity; n=3;
           Sophophora|Rep: Regulator of gene activity - Drosophila
           melanogaster (Fruit fly)
          Length = 585

 Score = 43.2 bits (97), Expect = 0.009
 Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
 Frame = +2

Query: 449 LSPGRDSTAMPGGAPPSMASR-ATLFGQRTFADRRVTMPTTLSQAXXXXXXXXXXXXRFN 625
           LSP R++    GG   S  +R A LFGQR F +RR                       + 
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERRAMQGLGSGPMSNMGNFMQTGRGGYG 131

Query: 626 AG-------NNYHSVFGEGG--DTSTQPLLDLSEF 703
            G       NN+H VFG GG  DTST  LLD +EF
Sbjct: 132 TGGGGGGPLNNFH-VFGGGGGSDTSTPALLDPTEF 165


>UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:
           ENSANGP00000026958 - Anopheles gambiae str. PEST
          Length = 537

 Score = 38.7 bits (86), Expect = 0.18
 Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 623 NAGNNYHSVF-GEGGDTSTQPLLDLSEF 703
           N+ NNYH VF G   +T T PLLDLSEF
Sbjct: 140 NSINNYHGVFDGSAAETGTPPLLDLSEF 167


>UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 598

 Score = 36.3 bits (80), Expect = 0.98
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +3

Query: 3   NNMAACCLG*CGVQRNRMKILKHLSVT*RCIKFTVFYSSVLREDSFMYHLYW 158
           N   A     CG+  N M+I++HL++  + I+F     ++L    F+  +YW
Sbjct: 336 NTSIATIFAKCGIHSNLMEIMQHLAIFYQSIQFAASSRNLLEPRDFLNDIYW 387


>UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 2 isoform b; n=2;
           Endopterygota|Rep: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 2 isoform b - Tribolium
           castaneum
          Length = 483

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +2

Query: 428 TPTFGGALSPGRDSTAMPGGAPPSMASRAT-LFGQRTFADRRVTMPTTLSQAXXXXXXXX 604
           T   GG+ S GR S +       SM+   T +FGQR  +DRR  +P   + +        
Sbjct: 7   TRNIGGS-SLGRSSVSFGSN---SMSGHVTPVFGQRAPSDRR-GIPAMGNSSQMGNMNSL 61

Query: 605 XXXXRFNAGNNYHSVFGEGGDTSTQPLLDLSEF 703
                FN      SVFG G DT+T  LLDLSEF
Sbjct: 62  GGYSSFN------SVFGSG-DTNTPSLLDLSEF 87


>UniRef50_A0DPM4 Cluster: Chromosome undetermined scaffold_59, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_59,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 426

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 145 YIKLSSRKTLL*NTVNLIHLY---VTDKCFKIFIRFR*TPHYPKQQAAILF 2
           Y+K+S  K LL   + L+H     VTD  F+IF+R        KQ +AILF
Sbjct: 237 YVKISEDKNLLDGILALMHYMRESVTDIIFEIFVRSANQAFNRKQSSAILF 287


>UniRef50_A2RB58 Cluster: Contig An18c0170, complete genome; n=2;
           Aspergillus|Rep: Contig An18c0170, complete genome -
           Aspergillus niger
          Length = 658

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 435 LLGAPCRLAV-IQLQCQAELPHQWHLELRCLVNELLQTEGLQCQQLYLKLILIQC 596
           LL A C +   ++++  +++P   H EL+  +N ++Q + L C +    L+++ C
Sbjct: 209 LLNAICTIGSRVEIRSGSQIPDLLHAELKRSINVVIQNKNLNCLESVQALLIVAC 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,616,435
Number of Sequences: 1657284
Number of extensions: 14309228
Number of successful extensions: 33228
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33215
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)