Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M06
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39741-2|AAQ81278.1|  279|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    30   2.4  
AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde dehy...    28   9.7  
AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde dehy...    28   9.7  
AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde dehy...    28   9.7  

>U39741-2|AAQ81278.1|  279|Caenorhabditis elegans Hypothetical
           protein F12D9.1b protein.
          Length = 279

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +3

Query: 510 ELRCLVNELLQTEGLQCQQLYLKLILIQCRV*VICHGSTLAITTIQFLVKVVTHQHNHFW 689
           E +C +N LL    L    L    ++I+  +  + H S   +    F + VV H  + F+
Sbjct: 145 EYKCYLNPLLSQVDLTDISLASLAVIIRLGLPALLHVSGALVCCFAFFLGVVGHIRSSFY 204

Query: 690 T*ANSIT 710
           T  +SIT
Sbjct: 205 TLFSSIT 211


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 157 QYKWYIKLSSRKTLL*NTVNLIHLYVTDKCFKIF 56
           QYK  +KLS     + N +N+IH +V DK  K F
Sbjct: 98  QYKLIVKLSHVAADIDNEINVIHKFVRDKYEKRF 131


>AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical
           protein T11F8.1 protein.
          Length = 261

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 211 LVYYIEAEIFILA-EYTRL*TILILYKIVEQGLIIGYGK 324
           ++ + E E+F L+ E+ R    LI++ I+  GL+IG+ K
Sbjct: 23  VILFYEYEVFDLSDEWHRFNLYLIIFTIMVLGLLIGFAK 61


>AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform c protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
 Frame = +1

Query: 652 W*RW*HINTTTSGPKRI-------PSLTAEAR-VTNHHYSTPXRGSKPYVGMVNSRH 798
           W +W +   T   P  I       P L A  R   N  Y    + SK Y  M+N RH
Sbjct: 233 WGKWLNCGQTCLAPDYILVNSTVKPKLVAAIRKYVNEFYGEDVKASKDYARMINQRH 289


>AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform b protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
 Frame = +1

Query: 652 W*RW*HINTTTSGPKRI-------PSLTAEAR-VTNHHYSTPXRGSKPYVGMVNSRH 798
           W +W +   T   P  I       P L A  R   N  Y    + SK Y  M+N RH
Sbjct: 233 WGKWLNCGQTCLAPDYILVNSTVKPKLVAAIRKYVNEFYGEDVKASKDYARMINQRH 289


>AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform a protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
 Frame = +1

Query: 652 W*RW*HINTTTSGPKRI-------PSLTAEAR-VTNHHYSTPXRGSKPYVGMVNSRH 798
           W +W +   T   P  I       P L A  R   N  Y    + SK Y  M+N RH
Sbjct: 233 WGKWLNCGQTCLAPDYILVNSTVKPKLVAAIRKYVNEFYGEDVKASKDYARMINQRH 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,020,908
Number of Sequences: 27780
Number of extensions: 356090
Number of successful extensions: 790
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)