BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_M03 (865 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 353 9e-98 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 353 9e-98 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 353 9e-98 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 353 9e-98 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 195 3e-50 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 195 3e-50 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 102 3e-22 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 99 3e-21 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 2e-08 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 2e-08 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 52 4e-07 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 5e-07 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 7e-07 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 8e-06 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 43 3e-04 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 43 3e-04 At5g13650.2 68418.m01585 elongation factor family protein contai... 42 4e-04 At5g13650.1 68418.m01584 elongation factor family protein contai... 42 4e-04 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 0.001 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 0.002 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.004 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.020 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.020 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.11 At5g19470.1 68418.m02320 MutT/nudix family protein similar to SP... 32 0.43 At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 1.3 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.7 At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 30 2.3 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.3 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.3 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 2.3 At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 28 7.0 At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 28 7.0 At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 9.2 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 353 bits (868), Expect = 9e-98 Identities = 167/213 (78%), Positives = 185/213 (86%) Frame = +3 Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 245 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 246 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 426 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKX 605 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 606 IGYSPAAVAFVPISGWHGDNMLEPSTKXALVQG 704 +GY+P + FVPISG+ GDNM+E ST +G Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 353 bits (868), Expect = 9e-98 Identities = 167/213 (78%), Positives = 185/213 (86%) Frame = +3 Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 245 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 246 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 426 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKX 605 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 606 IGYSPAAVAFVPISGWHGDNMLEPSTKXALVQG 704 +GY+P + FVPISG+ GDNM+E ST +G Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 353 bits (868), Expect = 9e-98 Identities = 167/213 (78%), Positives = 185/213 (86%) Frame = +3 Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 245 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 246 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 426 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKX 605 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 606 IGYSPAAVAFVPISGWHGDNMLEPSTKXALVQG 704 +GY+P + FVPISG+ GDNM+E ST +G Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 353 bits (868), Expect = 9e-98 Identities = 167/213 (78%), Positives = 185/213 (86%) Frame = +3 Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 245 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 246 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 426 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKX 605 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+K Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 606 IGYSPAAVAFVPISGWHGDNMLEPSTKXALVQG 704 +GY+P + FVPISG+ GDNM+E ST +G Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 195 bits (476), Expect = 3e-50 Identities = 87/198 (43%), Positives = 136/198 (68%), Gaps = 1/198 (0%) Frame = +3 Query: 81 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 260 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 261 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 440 ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357 Query: 441 GISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKXIGYS 617 G GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFK 415 Query: 618 PAAVAFVPISGWHGDNML 671 +++ ++P+S N++ Sbjct: 416 DSSLTWIPLSAMENQNLV 433 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 195 bits (476), Expect = 3e-50 Identities = 92/199 (46%), Positives = 136/199 (68%), Gaps = 1/199 (0%) Frame = +3 Query: 75 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 254 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 255 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 434 + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217 Query: 435 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKXIGY 614 E G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GY Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277 Query: 615 SPAA-VAFVPISGWHGDNM 668 + V F+PISG G NM Sbjct: 278 NTKKDVVFLPISGLMGKNM 296 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 102 bits (245), Expect = 3e-22 Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 1/179 (0%) Frame = +3 Query: 63 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 242 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116 Query: 243 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422 +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176 Query: 423 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 596 G QT+EH LLA +GV ++V +NK D + E E+++ +SSY Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 99.1 bits (236), Expect = 3e-21 Identities = 66/198 (33%), Positives = 96/198 (48%) Frame = +3 Query: 72 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 251 + K H+N+ IGHVD GK+T T + K E GK +DK Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107 Query: 252 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 431 E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167 Query: 432 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKXIG 611 QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG 220 Query: 612 YSPAAVAFVPISGWHGDN 665 + +S G N Sbjct: 221 DDIPIIRGSALSALQGTN 238 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 56.4 bits (130), Expect = 2e-08 Identities = 41/128 (32%), Positives = 61/128 (47%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 270 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 449 +GITI A Y V IID PGH DF + D A+L++ + G I+ Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 450 KNGQTREH 473 + Q R + Sbjct: 177 VDRQMRRY 184 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 56.4 bits (130), Expect = 2e-08 Identities = 41/128 (32%), Positives = 61/128 (47%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 270 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 449 +GITI A Y V IID PGH DF + D A+L++ + G I+ Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 450 KNGQTREH 473 + Q R + Sbjct: 177 VDRQMRRY 184 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 52.4 bits (120), Expect = 4e-07 Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 4/174 (2%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 N +I H+D GKST L+ G + R + K F LD + ERE Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131 Query: 270 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 437 RGITI + + +E + + + +ID PGH DF + + + A+L+V A G E Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 190 Query: 438 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 599 A QT + LA + ++I +NK+D P +EP E++ +E+ I Sbjct: 191 A------QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 52.0 bits (119), Expect = 5e-07 Identities = 36/113 (31%), Positives = 53/113 (46%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 NI ++ HVD GK+T HLI GG + GK F +D L E+ Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57 Query: 270 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428 R IT+ + + Y + +ID+PGH DF + T +D A+++V A G Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 51.6 bits (118), Expect = 7e-07 Identities = 36/117 (30%), Positives = 56/117 (47%) Frame = +3 Query: 78 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 257 K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++ Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140 Query: 258 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428 E+ERGITI A K+ + IID PGH DF + D A+ + + G Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 48.0 bits (109), Expect = 8e-06 Identities = 58/189 (30%), Positives = 80/189 (42%), Gaps = 9/189 (4%) Frame = +3 Query: 54 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 233 D K EK N +I H+D GKST L+ G I K G G +Y Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102 Query: 234 AWVLDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTS 386 LDKL +RERGIT+ E S Y + +ID PGH DF + S Sbjct: 103 ---LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLS 157 Query: 387 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 566 A+L+V A G QT + LAF + ++ +NK+D P ++P Sbjct: 158 ACQGALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP-- 204 Query: 567 EEIKKEVSS 593 E +K ++ S Sbjct: 205 ERVKAQLKS 213 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 42.7 bits (96), Expect = 3e-04 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Frame = +3 Query: 60 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 230 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 231 YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 377 Y DK + +E T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 378 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 557 G + D A+L++AA QT EH + +K +I+ NK+D + Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200 Query: 558 PRFEEIKKEVSS 593 + E I+K +++ Sbjct: 201 EQHEAIQKFITN 212 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 42.7 bits (96), Expect = 3e-04 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Frame = +3 Query: 60 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 230 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 231 YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 377 Y DK + +E T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 378 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 557 G + D A+L++AA QT EH + +K +I+ NK+D + Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200 Query: 558 PRFEEIKKEVSS 593 + E I+K +++ Sbjct: 201 EQHEAIQKFITN 212 >At5g13650.2 68418.m01585 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 676 Score = 42.3 bits (95), Expect = 4e-04 Identities = 46/159 (28%), Positives = 66/159 (41%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129 Query: 270 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 449 RGITI V IID PGH DF + + D +L+V + G Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185 Query: 450 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 566 QTR A G ++V VNK+D P + P F Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217 >At5g13650.1 68418.m01584 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 675 Score = 42.3 bits (95), Expect = 4e-04 Identities = 46/159 (28%), Positives = 66/159 (41%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128 Query: 270 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 449 RGITI V IID PGH DF + + D +L+V + G Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184 Query: 450 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 566 QTR A G ++V VNK+D P + P F Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 40.7 bits (91), Expect = 0.001 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 8/186 (4%) Frame = +3 Query: 60 PKMGKEKTHINIVVIGHVDSGKST----TTG-HLIYKCGGIDKR-TIEKFEKEAQEMGKG 221 P++ + INI IGHV GKST +G H + +++ TI+ A+ Sbjct: 25 PEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANAKIYKCE 84 Query: 222 SFKYAWVLDKLKAERERGITIDIALWKFETSKY--YVTIIDAPGHRDFIKNMITGTSQAD 395 + +E + D++ + K +V+ +D PGH + M+ G + D Sbjct: 85 KCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMD 144 Query: 396 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 575 A+LI+AA QT EH + +K +I+ NK+D + + + E+I Sbjct: 145 GALLIIAANE------TCPQPQTAEHLASVDMMHLKDIIIIQNKIDLIQENEAIKQHEDI 198 Query: 576 KKEVSS 593 ++ +++ Sbjct: 199 QRFITN 204 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 40.3 bits (90), Expect = 0.002 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%) Frame = +3 Query: 303 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 470 FE SK +V+ +D PGH + M+ G + D A+L++AA QT E Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165 Query: 471 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 599 H + +K +I+ NK+D + + + E I+K + + + Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 39.1 bits (87), Expect = 0.004 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 257 N+ VI HVD GKST T L+ G I + + + A E +G + K + + Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80 Query: 258 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413 E ++ + ++Y + +ID+PGH DF + D A+++V Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 36.7 bits (81), Expect = 0.020 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 N+ ++GH+ GK+ L+ + + K EK KY D E+E Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187 Query: 270 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428 R I+I + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 36.7 bits (81), Expect = 0.020 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Frame = +3 Query: 90 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 269 N+ ++GH+ GK+ L+ + + K EK KY D E+E Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187 Query: 270 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428 R I+I + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 34.3 bits (75), Expect = 0.11 Identities = 28/90 (31%), Positives = 43/90 (47%) Frame = +3 Query: 324 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 503 +T +D PGH F + G + D VL+VAA G QT E A + V Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321 Query: 504 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 593 ++V +NK D P + P E++K +++S Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTS 346 >At5g19470.1 68418.m02320 MutT/nudix family protein similar to SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase) {Schizosaccharomyces pombe}; contains Pfam profile PF00293: NUDIX domain Length = 365 Score = 32.3 bits (70), Expect = 0.43 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +3 Query: 459 QTREHALLAFTLGVKQLIVGV-NKMDSTEPPYSEPRFEEIKKEVSSYIKXIGYSPAAVAF 635 +TR A + LG K +I G+ N++ +P ++ P F I++ + Y GY+ + Sbjct: 145 RTRAVAHVIKILGNKGIIPGIRNELYPVKPSFNAPAFFSIERAAAPYFGLKGYAIHVNGY 204 Query: 636 VPISG----WHGDNMLEPSTKXALVQGMAGG 716 V G W G L ST + + G Sbjct: 205 VERDGQKFLWIGKRSLAKSTYPGKLDHLVAG 235 >At3g01360.1 68416.m00057 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) Length = 319 Score = 30.7 bits (66), Expect = 1.3 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = +3 Query: 333 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 509 I GH D+ + T Q +C + L+V TG F +KNG R+ LG + Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285 Query: 510 IVGVNKMDSTEPPYSEPRFE-EIKKEV 587 + +DS E E R E + KEV Sbjct: 286 NLSTFTLDSDEE--DEVREESNVAKEV 310 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 30.3 bits (65), Expect = 1.7 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = +3 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 509 +ID PGH F G+S D A+L+V + + G+ QT E +L + + Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756 Query: 510 IVGVNKMD 533 I+ +NK+D Sbjct: 757 IIALNKVD 764 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 30.3 bits (65), Expect = 1.7 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +3 Query: 324 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 503 + +ID PGH F G++ D A+L+V + G+ QT E L VK Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610 Query: 504 QLIVGVNKMD 533 I+ +NK+D Sbjct: 611 -FIIALNKVD 619 >At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ornithine--oxo-acid aminotransferase, putative similar to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13) (Ornithine--oxo-acid aminotransferase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00202: aminotransferase, class III Length = 475 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +3 Query: 489 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKXIGYSPAAVAFVPISG 650 T GV++ G+ + +S PP S R E++ E S++ Y P V F +G Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 29.9 bits (64), Expect = 2.3 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413 +ID PGH F G+S D A+L+V Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 29.9 bits (64), Expect = 2.3 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413 +ID PGH F G+S D A+L+V Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 29.9 bits (64), Expect = 2.3 Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Frame = +3 Query: 249 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 416 K+ A GIT I +K +D PGH F G D A+++VA Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584 Query: 417 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 596 A G QT E A+ +++ +NK+D + P + + +E+SS Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKIDKEG---ASP--DRVMQELSS- 630 Query: 597 IKXIGYSP----AAVAFVPISGWHGDNM 668 IG P V V IS G+N+ Sbjct: 631 ---IGLMPEDWGGDVPMVQISALKGENV 655 >At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) Length = 442 Score = 28.3 bits (60), Expect = 7.0 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 534 STEPPYSEPRFEEIKKEVSSYIKXIGYSPAAVAFVPIS 647 +TE + P+ E K E+S++I IG+ V F P S Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100 >At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) Length = 440 Score = 28.3 bits (60), Expect = 7.0 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 534 STEPPYSEPRFEEIKKEVSSYIKXIGYSPAAVAFVPIS 647 +TE + P+ E K E+S++I IG+ V F P S Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100 >At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase Length = 1184 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +3 Query: 435 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 593 E+G +TR+H G++ LI+ ++D E R E K VS+ Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,425,998 Number of Sequences: 28952 Number of extensions: 381164 Number of successful extensions: 1079 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1016 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1063 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 2019160800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -