Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M02
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81063-5|CAB02956.1|  242|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U29097-6|AAK68336.1|  139|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
 Frame = +1

Query: 43  ERGEDDLAKIGVGALDFAVYQSRH-KHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTP 219
           + GEDD+ ++        +Y   H KHL F D +   K  +  +++A    DSS+L   P
Sbjct: 165 DTGEDDVYRVAF------IYDDDHGKHLQFSDLNMHDKEFRTYSRQASIAADSSVLIPVP 218

Query: 220 SSSTN----GTETLV--PEDNLYALMP 282
            +       G+ +++  P DNL  ++P
Sbjct: 219 HAIGGVIVLGSNSVLYKPNDNLGEVVP 245


>Z81063-5|CAB02956.1|  242|Caenorhabditis elegans Hypothetical
           protein F15D3.7 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 40  SERGEDDLAKIGVGALDFAVYQSRH 114
           S R ED+L   G GAL  A+Y+S H
Sbjct: 181 SVRAEDELNGFGAGALTGAIYRSPH 205


>U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical
           protein ZC204.7 protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 485 IIQAVDKKNVSRNYLMNDTVC 547
           I + +D +N+ R+Y  NDTVC
Sbjct: 253 IFEGIDVENLERDYRSNDTVC 273


>U29097-6|AAK68336.1|  139|Caenorhabditis elegans Hypothetical
           protein F18C5.9 protein.
          Length = 139

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 294 ISECG*NSKIKTLF**CEDW*ADHWSCNQQNCVRX*CLRFFAQQDPLPD 440
           ++ CG  ++   L   C    ADH  C ++N V   CL + A Q  +P+
Sbjct: 58  LNTCGPKNQTVQLMWDCASSRADHTECCKKNNVLPACLPYCAAQGTVPN 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,474,348
Number of Sequences: 27780
Number of extensions: 341750
Number of successful extensions: 999
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)