Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M02
         (819 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g35560.1 68417.m05053 expressed protein                             32   0.40 
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote...    32   0.53 
At1g05880.1 68414.m00616 expressed protein                             30   1.6  
At4g12700.1 68417.m01994 expressed protein                             29   3.7  
At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) ident...    28   6.5  
At4g21640.1 68417.m03136 subtilase family protein similar to sub...    28   8.6  
At2g23520.1 68415.m02807 expressed protein ; expression supporte...    28   8.6  

>At4g35560.1 68417.m05053 expressed protein 
          Length = 917

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -2

Query: 269 YKLSSGTRVSVPLVD-DEGVSSSKEESNKAPASLAMN*CNFNLLLRSWKVRCLCLDWYTA 93
           Y  S+G+RVSV   + D  + S   +   +P S AM  C  NL  +S K+    L W  A
Sbjct: 88  YLASNGSRVSVGYSNGDILIWSIPSKGECSPESSAMI-CKLNLGYKSEKIPIASLKWVYA 146

Query: 92  KSKAPTPILAKSSS 51
           + KA    +  SSS
Sbjct: 147 EGKASRVYVIGSSS 160


>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
           kinase, putative protein kinase Xa21 - Oryza sativa,
           PIR:A57676
          Length = 1010

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 383 LLITAPMISSPVFTLSKKCLNLAVLSTFRNVSNGGINAY 267
           L++   M+S P+ T   K LNL  LS F N  +GGI A+
Sbjct: 390 LILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAF 428


>At1g05880.1 68414.m00616 expressed protein
          Length = 426

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -2

Query: 131 WKVRCLCLDWYT-AKSKAPTPILAKSSSPLSDSHVFCNCC 15
           W V C+C  W   A+S   +  L +   P  D+  FC  C
Sbjct: 58  WNVDCICKQWSAGAQSVRDSVGLLELDPPSDDNEYFCGAC 97


>At4g12700.1 68417.m01994 expressed protein
          Length = 561

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +1

Query: 244 TLVPEDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASG 396
           T  PED L+       TFL  +  A L+     VKTGE  + A  N+TA G
Sbjct: 47  TYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAA--NQTAFG 95


>At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2)
           identical to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4)
           (AtPLDp2) (Phospholipase D2 PHOX and PX containing
           domain) (Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis
           thaliana}; similar to phospholipase D GB:BAA24577 from
           [Rattus norvegicus]; contains Pfam profile: PF00614
           phospholipase D, PF00169 PH domain, PF00787 PX domain
          Length = 1046

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +3

Query: 657 STDDFPLIYKKTMDMKGENYEAILEKSQASIIQLHSXLSEHL 782
           +TD  PL+   T++++ + ++  L+K  + ++ LH  L + L
Sbjct: 57  TTDFSPLLLSYTLELQYKQFKWTLQKKASQVLYLHFALKKRL 98


>At4g21640.1 68417.m03136 subtilase family protein similar to
           subtilase SP1 [Oryza sativa] GI:9957714
          Length = 733

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 320 LAVLSTFRNVSNGGINAYKLSSGTRVSVPLV 228
           +++L+    +  G  N +KL SGT +S P+V
Sbjct: 492 VSILAAVSPLDPGAFNGFKLHSGTSMSTPVV 522


>At2g23520.1 68415.m02807 expressed protein ; expression supported
           by MPSS
          Length = 862

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 104 WYTAKSKAPTPILAKSSSPLSD 39
           W+T+K ++P P+    SSP+ D
Sbjct: 521 WFTSKRQSPKPVAKSYSSPMYD 542


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,480,312
Number of Sequences: 28952
Number of extensions: 320772
Number of successful extensions: 901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)