Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L23
(852 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 86 1e-18
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 61 5e-11
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 61 5e-11
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 61 5e-11
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 61 5e-11
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 6.7
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 85.8 bits (203), Expect = 1e-18
Identities = 46/86 (53%), Positives = 48/86 (55%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACWSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAS 284
MRECISVHVGQAGVQIGN CW T WS AS+ RCP+TR S ST SS R AS
Sbjct: 1 MRECISVHVGQAGVQIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAS 60
Query: 285 TYPVXXXXXXXXXXXXXXALAHTDSC 362
T PV A A T SC
Sbjct: 61 TCPVPCSSIWSRPSSMRCAPARTASC 86
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 60.9 bits (141), Expect = 5e-11
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +2
Query: 422 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 601
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 602 LEFAIYPAPQVSTAVVEP 655
+++ P+P+VS VVEP
Sbjct: 61 NTYSVVPSPKVSDTVVEP 78
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D +D EA+Y C R + P+Y +LN +S + L F
Sbjct: 79 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRF 138
Query: 837 DG 842
G
Sbjct: 139 PG 140
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 60.9 bits (141), Expect = 5e-11
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +2
Query: 422 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 601
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 602 LEFAIYPAPQVSTAVVEP 655
+++ P+P+VS VVEP
Sbjct: 61 NTYSVVPSPKVSDTVVEP 78
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D +D EA+Y C R + P+Y +LN +S + L F
Sbjct: 79 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRF 138
Query: 837 DG 842
G
Sbjct: 139 PG 140
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 60.9 bits (141), Expect = 5e-11
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +2
Query: 422 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 601
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 602 LEFAIYPAPQVSTAVVEP 655
+++ P+P+VS VVEP
Sbjct: 61 NTYSVVPSPKVSDTVVEP 78
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D +D EA+Y C R + P+Y +LN +S + L F
Sbjct: 79 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRF 138
Query: 837 DG 842
G
Sbjct: 139 PG 140
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 60.9 bits (141), Expect = 5e-11
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +2
Query: 422 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 601
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 602 LEFAIYPAPQVSTAVVEP 655
+++ P+P+VS VVEP
Sbjct: 61 NTYSVVPSPKVSDTVVEP 78
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D +D EA+Y C R + P+Y +LN +S + L F
Sbjct: 79 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRF 138
Query: 837 DG 842
G
Sbjct: 139 PG 140
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 210 CPQTRPSGVETILSTLSSARPELAS 284
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,333
Number of Sequences: 2352
Number of extensions: 16059
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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