Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L23
(852 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 293 1e-79
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 293 1e-79
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 292 2e-79
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 292 2e-79
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 281 6e-76
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 281 6e-76
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 267 6e-72
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 143 1e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 141 5e-34
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 141 5e-34
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 141 5e-34
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 140 1e-33
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 139 2e-33
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 138 3e-33
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 137 8e-33
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 134 7e-32
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 92 5e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 91 6e-19
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 31 0.74
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 30 1.7
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 29 5.2
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 29 5.2
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 29 5.2
At1g28470.1 68414.m03501 no apical meristem (NAM) family protein... 29 5.2
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 28 6.9
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (719), Expect = 1e-79
Identities = 134/163 (82%), Positives = 146/163 (89%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F +YP+PQVST+VVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D + ++D EAIY CRR PTYTNLN ++S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRECIS+H+GQAG+Q+GNACW
Sbjct: 1 MRECISIHIGQAGIQVGNACW 21
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (719), Expect = 1e-79
Identities = 134/163 (82%), Positives = 146/163 (89%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F +YP+PQVST+VVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D + ++D EAIY CRR PTYTNLN ++S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRECIS+H+GQAG+Q+GNACW
Sbjct: 1 MRECISIHIGQAGIQVGNACW 21
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 292 bits (716), Expect = 2e-79
Identities = 134/163 (82%), Positives = 145/163 (88%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F +YP+PQVST+VVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D + ++D EAIY CRR PTYTNLN ++S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRECIS+H+GQAG+Q+GNACW
Sbjct: 1 MRECISIHIGQAGIQVGNACW 21
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 292 bits (716), Expect = 2e-79
Identities = 134/163 (82%), Positives = 145/163 (88%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F +YP+PQVST+VVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D + ++D EAIY CRR PTYTNLN ++S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRECIS+H+GQAG+Q+GNACW
Sbjct: 1 MRECISIHIGQAGIQVGNACW 21
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 281 bits (688), Expect = 6e-76
Identities = 129/163 (79%), Positives = 141/163 (86%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEP 184
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D A ++D EAIY CRR PTYTNLN I+S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRE IS+H+GQAG+Q+GN+CW
Sbjct: 1 MREIISIHIGQAGIQVGNSCW 21
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 281 bits (688), Expect = 6e-76
Identities = 129/163 (79%), Positives = 141/163 (86%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEP 184
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D A ++D EAIY CRR PTYTNLN I+S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRE IS+H+GQAG+Q+GN+CW
Sbjct: 1 MREIISIHIGQAGIQVGNSCW 21
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 267 bits (655), Expect = 6e-72
Identities = 121/163 (74%), Positives = 139/163 (85%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
ELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF+DLEPT +DEVRTG
Sbjct: 22 ELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTG 81
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
TYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAV 141
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEP
Sbjct: 142 GGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEP 184
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YNS+L+TH+ L +D ++D EAIY CRR PTY+NLN +S + SL F
Sbjct: 185 YNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRF 244
Query: 837 DGA 845
DGA
Sbjct: 245 DGA 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACW 167
MRE IS+H+GQAG+Q+GN+CW
Sbjct: 1 MREIISIHIGQAGIQVGNSCW 21
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 143 bits (347), Expect = 1e-34
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTDVDEV 337
E+ C EHGI P G+ +G D + N +++E G++VPRA+ +DLEP +D V
Sbjct: 22 EVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSV 76
Query: 338 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 517
RTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF +
Sbjct: 77 RTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVC 136
Query: 518 HXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
H LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 141 bits (342), Expect = 5e-34
Identities = 65/163 (39%), Positives = 97/163 (59%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP +D +R+G
Sbjct: 22 EVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 80 PYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 141 bits (342), Expect = 5e-34
Identities = 65/163 (39%), Positives = 97/163 (59%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP +D +R+G
Sbjct: 22 EVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 80 PYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 141 bits (342), Expect = 5e-34
Identities = 64/163 (39%), Positives = 98/163 (60%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHG+ P G+ D + N +++E G++VPRAV +DLEP +D +R+G
Sbjct: 22 EVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSG 80
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 81 PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSL 140
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 141 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 183
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + SL F
Sbjct: 184 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRF 243
Query: 837 DG 842
G
Sbjct: 244 PG 245
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 140 bits (338), Expect = 1e-33
Identities = 65/163 (39%), Positives = 98/163 (60%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI GQ D + + N +F+E GK+VPRAV +DLEP +D +R+G
Sbjct: 22 EVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + + F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEP 182
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + PT+ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (336), Expect = 2e-33
Identities = 64/163 (39%), Positives = 98/163 (60%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI G+ D T + N +++E G++VPRAV +DLEP +D +R+G
Sbjct: 22 EVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSG 80
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 81 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSL 140
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 141 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 183
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + SL F
Sbjct: 184 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRF 243
Query: 837 DG 842
G
Sbjct: 244 PG 245
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 138 bits (335), Expect = 3e-33
Identities = 64/163 (39%), Positives = 97/163 (59%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI G+ + + + N +++E G+ VPRAV +DLEP +D VR+G
Sbjct: 22 EVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 80 PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + L F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 137 bits (332), Expect = 8e-33
Identities = 64/163 (39%), Positives = 98/163 (60%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ LEHGI G+ D + + N +++E G++VPRAV +DLEP +D VR+G
Sbjct: 22 EVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 80 PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + + F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEP 182
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + P++ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 134 bits (324), Expect = 7e-32
Identities = 63/163 (38%), Positives = 97/163 (59%)
Frame = +2
Query: 167 ELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTG 346
E+ C EHGI GQ D + + + +F+E GK+VPRAV +DLEP +D +R+G
Sbjct: 22 EVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSG 79
Query: 347 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXX 526
+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ LQGF + H
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSL 139
Query: 527 XXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 655
LL+ ++ +Y + + F+++P+P+VS VVEP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEP 182
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 657 YNSILTTHTXLXXSDCASMVDXEAIYXXCRRXSRX*APTYTNLNXSSXXIVSXIXXSLXF 836
YN+ L+ H + +D ++D EA+Y C R + PT+ +LN +S + L F
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRF 242
Query: 837 DG 842
G
Sbjct: 243 PG 244
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 91.9 bits (218), Expect = 5e-19
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Frame = +2
Query: 176 CLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTGTYR 355
CLEHGI DG + T GG D + FF + ++PRA+ +DLEP ++ ++ G YR
Sbjct: 26 CLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYR 83
Query: 356 QLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 529
L++ E + A NN+A G++ GK + + ++D I + AD L+GF++ H
Sbjct: 84 NLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIA 142
Query: 530 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEP 655
L+E L+ Y KK ++++P + S VV+P
Sbjct: 143 GGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQP 185
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 91.5 bits (217), Expect = 6e-19
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Frame = +2
Query: 176 CLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTGTYR 355
CLEHGI DG + T GG D + FF + ++PRA+ +DLEP ++ ++ G YR
Sbjct: 26 CLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYR 83
Query: 356 QLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 529
L++ E + A NN+A G++ GK + + ++D I + AD L+GF++ H
Sbjct: 84 NLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIA 142
Query: 530 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEP 655
L+E L+ Y KK ++++P + S VV+P
Sbjct: 143 GGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQP 185
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 182 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTDVD 331
E GIQ +G + ++ + G D +T F + A P FV+L+ ++D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Frame = -3
Query: 541 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 362
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 361 QLSVCASADLI---NISRFKIDEDSTGYVLASSGLAEESVERIVSTPD 227
L +++ + F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 158 CLLELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTD 325
C + LY L G P D +P K I GG + + S A +PR + VD ++
Sbjct: 204 CGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRIT 262
Query: 326 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
+ E+R + Q P L D + + I +E+V++ DR
Sbjct: 263 IPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 158 CLLELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTD 325
C + LY L G P D +P K I GG + + S A +PR + VD ++
Sbjct: 204 CGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRIT 262
Query: 326 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
+ E+R + Q P L D + + I +E+V++ DR
Sbjct: 263 IPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 158 CLLELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTD 325
C + LY L G P D +P K I GG + + S A +PR + VD ++
Sbjct: 204 CGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRIT 262
Query: 326 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
+ E+R + Q P L D + + I +E+V++ DR
Sbjct: 263 IPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At1g28470.1 68414.m03501 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM protein GI:6066594 from [Petunia hybrida]
Length = 314
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = -3
Query: 382 NKLFWMKQLSVCASAD-----LINISRFKIDEDSTGYVLASSGLAEESV----ERIVSTP 230
+K+F+ Q C S + L+N++RF + G+ G +EE+ E +V
Sbjct: 231 SKVFYQTQPRQCGSMEPKPKNLVNLNRFSYENIQAGFGYEHGGKSEETTQVIRELVVREG 290
Query: 229 DGLVCGHLAIRLDA 188
DG C L+ DA
Sbjct: 291 DG-SCSFLSFTCDA 303
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 239 DDSFNTFFSETGAGKHVPRAVFVDLEPTDVDEVRTGTYRQLFHPE 373
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,105,135
Number of Sequences: 28952
Number of extensions: 353043
Number of successful extensions: 958
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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