Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L22
(846 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 36 0.031
SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 30 2.1
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 30 2.7
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 30 2.7
SB_8898| Best HMM Match : WSC (HMM E-Value=6.4) 30 2.7
SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07) 29 3.6
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 29 6.3
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 29 6.3
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 28 8.3
SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015) 28 8.3
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 28 8.3
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 28 8.3
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 243 HDWCCNSFHRY--YNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCIRYLYHHC 82
H +CC HRY Y +HYC RHH +H CY Y + C Y +H+C
Sbjct: 20 HHYCCYCHHRYCYYRHHHYCWY---RHH-----YH--YPCYRHYYHRC--YRHHYC 63
>SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 31.9 bits (69), Expect = 0.67
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Frame = +3
Query: 246 RVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEGPAERRXXXXXXXXXXXXXXXR 425
+V E +K R S + +R+ R SP R R R P+ R
Sbjct: 201 KVSERTRK--RRHSGLQERSRDRIARSRSPRRSRAR--SPSGSRDSKGFWQVERPSDDSM 256
Query: 426 QENYGGER------RSFGGDERRRSPARESYRKPSG 515
Y G R RS G ER RSP R R PSG
Sbjct: 257 NRFYRGSRSLTHSTRSRDGRERSRSPHRSRVRSPSG 292
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = +3
Query: 252 DESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEGPAERRXXXXXXXXXXXXXXXRQE 431
D+S + YR S+ +S R GR S R R+ P+ R R
Sbjct: 253 DDSMNRFYRGSRSLTHSTRSRDGRERSRSPHRSRVRSPSGSRDSKGFWQEERPRDDFRDR 312
Query: 432 NYGGER 449
+Y G R
Sbjct: 313 SYRGSR 318
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 222 RSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERK 344
RSY+ D + SY+K+YR E ++ +REY P K
Sbjct: 1352 RSYDRGTDHLPRSYEKSYRRED--HHRSREYSSDHRHPSFK 1390
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -1
Query: 216 RYYNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCIRYLYHHCSSLVHNNHDLGTTY 40
+Y + Y Y + +LR + LH H C Y+ I Y YH +L H H L TT+
Sbjct: 99 KYPSHYTYRIPYTLRIPNTLHTTHTAYRTQCTYR---IPYRYHIRYTL-HVRHTLRTTH 153
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 246 CHDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHN 142
C+ N HRY++ +H+ + HHH H H+
Sbjct: 34 CYHKLKNPRHRYHHHHHHQHNHHQHHHHHNHHHHH 68
>SB_8898| Best HMM Match : WSC (HMM E-Value=6.4)
Length = 165
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Frame = -1
Query: 225 SFHRYYNEYHYCMMNSLRHHHGLHGFHNCLDC-------YCLYKNLCI-RYLYHH 85
S HR Y YC H + +H L C +C Y+ C+ RY Y+H
Sbjct: 32 SCHRVCRRYRYCKSFLFIKHKCHYKYHCYLKCSCKVKYYHCRYRRRCVWRYKYYH 86
>SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07)
Length = 483
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 171 HHHGLHGFHNCLDCYCLYKNLCIRYL-YHHCSSLV 70
H L G DC KNLC++YL HC+ LV
Sbjct: 204 HSISLEGCDINHDCIHTLKNLCLKYLNVSHCTKLV 238
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/96 (27%), Positives = 37/96 (38%)
Frame = +3
Query: 225 SYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEGPAERRXXXXXXXXX 404
SY SRD+ K++ SS + S+ R SP+R++ P RR
Sbjct: 605 SYRKSRDK---GRKRSQSRSSSRSRSSSYSRSRSRSPDRRKRSYSPPPRRRSPFRERRRS 661
Query: 405 XXXXXXRQENYGGERRSFGGDERRRSPARESYRKPS 512
R + +RRS + SPAR R S
Sbjct: 662 PPRRTSRWSSQSPDRRS--PARIKSSPARSRSRSQS 695
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 594 SYRGTPRSRASFTRRFADRTLNYNRAFXSVKGRSSIKSKKKHPQLKKI 737
SY +PR A+ +R + + Y KGR+ I +K+K+ + +
Sbjct: 109 SYEVSPRKNAAKSRNISKKVFFYRNGDKHFKGRTLIVTKQKYGSFESL 156
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 192 NNDTRYNSGGRSYNTSRDRVDESYK--KTYRNESSVNYSN 305
NND N+G N + D D +Y N+++ NY N
Sbjct: 111 NNDNNDNNGNNDNNDNNDNYDNNYNNDNNDNNDNNDNYDN 150
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -1
Query: 255 HLLCHDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHNC 139
HL CH + HR HY HHH H+C
Sbjct: 368 HLYCHRPRLSYHHRPSRHLHYHRFRLSIHHHPSSRHHHC 406
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 216 RYYNEYHYCMMNSLRHHHGLHGFHNCLD 133
R+ EY C+ S RHH +HG + +D
Sbjct: 10 RFIGEYDPCLEASYRHHLTVHGQYIAMD 37
>SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015)
Length = 504
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 192 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSN 305
NN+ N+ +YN + + + TY N ++ Y+N
Sbjct: 443 NNNNNNNNNNNTYNNNNSSNNNNNNNTYNNNNNNTYNN 480
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 28.3 bits (60), Expect = 8.3
Identities = 26/104 (25%), Positives = 42/104 (40%)
Frame = +3
Query: 192 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMEGPAE 371
++ +R NS +S + RDR +S + YR+ + +R + +RKR R +
Sbjct: 263 DHSSRRNSRDKSRDPDRDRPRDSERDRYRDIERDRHRDRRH---SRDRDRKRSRSRDRRK 319
Query: 372 RRXXXXXXXXXXXXXXXRQENYGGERRSFGGDERRRSPARESYR 503
R R + +RRS +RRS RE R
Sbjct: 320 SRSRSRDRRRSRSRERRRDDR---KRRSRERSPKRRSREREESR 360
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 246 CHDWCCNSFHRYYNEYHYCMMNS--LRHHHGLHGFHN 142
C+ N HRY++ +H+ ++ HHH H HN
Sbjct: 246 CYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHHHHHHN 282
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = -1
Query: 219 HRYYNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCIRYLYHHCSSLVHN 64
H ++ + + + RHHH H +N Y N+ I+ + HH ++ N
Sbjct: 323 HHHHQRHRHRHRHRHRHHHHHHHEYNRRHRYFTDINITIQIIRHHFIIIIIN 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,701,908
Number of Sequences: 59808
Number of extensions: 330876
Number of successful extensions: 1123
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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