Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L21
         (860 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote...    32   0.56 
At4g12700.1 68417.m01994 expressed protein                             30   2.3  
At1g12890.1 68414.m01497 AP2 domain-containing transcription fac...    29   5.3  
At5g49730.1 68418.m06158 ferric reductase-like transmembrane com...    28   7.0  
At4g21640.1 68417.m03136 subtilase family protein similar to sub...    28   9.2  
At3g60630.1 68416.m06784 scarecrow transcription factor family p...    28   9.2  

>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
           kinase, putative protein kinase Xa21 - Oryza sativa,
           PIR:A57676
          Length = 1010

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 563 LLITAPMISSPVFTLSKKCLNLAVLSTFRNVSNGGINAY 447
           L++   M+S P+ T   K LNL  LS F N  +GGI A+
Sbjct: 390 LILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAF 428


>At4g12700.1 68417.m01994 expressed protein
          Length = 561

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +1

Query: 424 TLVPEDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKV 591
           T  PED L+       TFL  +  A L+     VKTGE  + A  N+TA G  + +
Sbjct: 47  TYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAA--NQTAFGGFINI 100


>At1g12890.1 68414.m01497 AP2 domain-containing transcription
           factor, putative
          Length = 219

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 159 HPIKDPFKFFFSQHEVMLLRFQKKFSQCYND 67
           H + DP    FSQ +         FS CYND
Sbjct: 115 HFVADPISSSFSQKQESSTNLTNTFSHCYND 145


>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
           component family protein similar to ferric-chelate
           reductase (FRO1) [Pisum sativum] GI:15341529; contains
           Pfam profile PF01794: Ferric reductase like
           transmembrane componenent
          Length = 738

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 26  WSPFRLIIE*VFSQSL*H*LNFFW-KRNNITSCWEKKNLNGSFIGCVLSGAV 178
           WS   LII  +   S+   L+ F+ KR NIT+ W K  L   F+GC+++  +
Sbjct: 567 WSGLYLIISTIGFISMITLLDIFYIKRYNITTWWYKGLL---FVGCMVASVL 615


>At4g21640.1 68417.m03136 subtilase family protein similar to
           subtilase SP1 [Oryza sativa] GI:9957714
          Length = 733

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 500 LAVLSTFRNVSNGGINAYKLSSGTRVSVPLV 408
           +++L+    +  G  N +KL SGT +S P+V
Sbjct: 492 VSILAAVSPLDPGAFNGFKLHSGTSMSTPVV 522


>At3g60630.1 68416.m06784 scarecrow transcription factor family
           protein scarecrow-like 6, Arabidopsis thaliana,
           EMBL:AF036303
          Length = 623

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 322 CYDLGR*GAYVSTGIQQSXKAPTPILAKSSSPLSDSH 212
           C+ +   G    T +  S ++P+P ++ S++ LS SH
Sbjct: 43  CFVVNNGGFSEPTSVLDSVRSPSPFVSSSTTTLSSSH 79


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,639,656
Number of Sequences: 28952
Number of extensions: 320462
Number of successful extensions: 726
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)