Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L20
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 483 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 364
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 483 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 364
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 117 LSTCCRCGQNHP 152
           L TC RC  N+P
Sbjct: 512 LQTCVRCPNNYP 523


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 586 VFGHSTSASRHDWNQEGSRVELLKI 660
           +FGH TS +R+     G+  E L I
Sbjct: 105 IFGHETSCTRYWTCWNGTATEQLCI 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,598
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)