Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L20
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 205 7e-54
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 131 1e-31
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 127 2e-30
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 124 2e-29
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 117 2e-27
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 104 1e-23
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 90 3e-19
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 86 5e-18
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 38 0.002
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 28 1.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 4.2
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 26 5.6
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 5.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.6
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 7.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.4
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 25 9.8
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.8
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 9.8
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 205 bits (500), Expect = 7e-54
Identities = 102/162 (62%), Positives = 126/162 (77%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P+ DKL+VD G+ VISNDGATIMKLLDI+HPAAKTLVDIA++QDAEVGDGTTSVV+ A
Sbjct: 46 PLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFA 105
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 517
GE+L+ + FVE+GV ++IR R A++LA+ KIKE A+ +D + RDLL KCAST
Sbjct: 106 GELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCAST 165
Query: 518 AMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPG 643
AM+SKLI F+K+VVDAVL+LD L +MIGIKKVPG
Sbjct: 166 AMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPG 207
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 630 RRFPGGALEDSXLVPGVAFXKTFSYAGFEMXPKTYKD 740
++ PGGA+EDS LV GVAF KTFSYAGFE PK +K+
Sbjct: 203 KKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKN 239
Score = 55.2 bits (127), Expect = 1e-08
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 58 LREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRG 165
L+EGTD +QG+ QL+SNINAC V D +RTTLGP G
Sbjct: 13 LKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLG 48
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 131 bits (316), Expect = 1e-31
Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
PV +DK++VD G ++NDGATI+ LLD+ HPA K LV++A+ QD EVGDGTTSVVI+A
Sbjct: 43 PVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIA 102
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCAS 514
E+L+R V+ +HP +I R A R A++ + + + +D+ E L+ A
Sbjct: 103 AELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGKES----LINVAK 158
Query: 515 TAMSSKLIHQQKDHFSKIVVDAVLSLDT 598
T+MSSK+I D FS + VDA+LS+ T
Sbjct: 159 TSMSSKIIGNDSDFFSTMAVDAMLSVKT 186
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 127 bits (307), Expect = 2e-30
Identities = 62/148 (41%), Positives = 99/148 (66%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P MDK+I G+ +++NDGATI+K L ++HPAAK LVD++ +QD E GDGTTSVVILA
Sbjct: 41 PKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILA 100
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 517
G +L + +++G+HP V+ + + A+ ++ +KE A+ I+ R+ LL+ A+T
Sbjct: 101 GSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE----LSDRESLLRAATT 156
Query: 518 AMSSKLIHQQKDHFSKIVVDAVLSLDTP 601
+++SK++ Q + + I VDAVL + P
Sbjct: 157 SLNSKIVSQYSNLLAPIAVDAVLKVIDP 184
Score = 34.7 bits (76), Expect = 0.016
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 76 QTQGKPQLV--SNINACQLVVDAVRTTLGPRG 165
Q + KPQ V SNI A + V DA+RT+LGP+G
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKG 43
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 124 bits (298), Expect = 2e-29
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Frame = +2
Query: 158 PVXMDKLIVDHN-GKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVIL 334
P MDK++ ++ G V++NDGATI+K + + + AAK LV+I+K QD EVGDGTTSV +
Sbjct: 42 PKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVF 101
Query: 335 AGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKS-PEEQRDLLLKCA 511
A E+L++ + V +HP+V+I R A++ AI+ ++ A IDN S P + R L A
Sbjct: 102 AAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALR--ASSIDNSSDPAKFRSDLENIA 159
Query: 512 STAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPG 643
T +SSK++ Q K+HF+++ VDAVL L LD I I K+ G
Sbjct: 160 RTTLSSKILSQNKNHFAQLAVDAVLRLKGS-TNLDNIQIIKILG 202
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 117 bits (281), Expect = 2e-27
Identities = 55/145 (37%), Positives = 96/145 (66%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P +DK+++ +G+ ++NDGATI+ +++ H AK LV ++KSQD E+GDGTT VV+LA
Sbjct: 56 PRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLA 115
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 517
G +L++ + +++G+HP + A ++A++ + + +D SPE + L + A T
Sbjct: 116 GALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVD-FSPENTTN-LFRSAKT 173
Query: 518 AMSSKLIHQQKDHFSKIVVDAVLSL 592
++ SK++ + DHF+ I VDAVLS+
Sbjct: 174 SLGSKVVSKAHDHFANIAVDAVLSV 198
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 61 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRG 165
+E + G + S+I A + V + VRT+LGPRG
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRG 58
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 104 bits (250), Expect = 1e-23
Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P M K+++D G +++NDG I++ +++ HPAAK+++++A++QD EVGDGTTSV+ILA
Sbjct: 41 PRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILA 100
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 517
GEIL P ++ +HP V+IR+ + A A+ I E + ++ E L+ C T
Sbjct: 101 GEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGT 160
Query: 518 AMSSKLIHQQKD---HFSKIVVDAVLSLDTPLLPLDM---IGIKKVPG 643
KL+ + D H + V V S + +D+ ++KVPG
Sbjct: 161 ----KLVARWSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPG 204
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 67 GTDQTQGKPQLVSNINACQLVVDAVRTTLGPR 162
G Q K Q+ SNI A + V D +RT LGPR
Sbjct: 12 GNRQVGHKAQM-SNIQAAKAVADVIRTCLGPR 42
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 90.2 bits (214), Expect = 3e-19
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P K++VD G ++ DG ++ + I +P A + A +QD GDGTTSV +L
Sbjct: 38 PTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLV 97
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 517
GE+LK+ + ++ EG+HP ++ A A+ + + K D E R++LL A T
Sbjct: 98 GELLKQAELYIREGLHPSLISDGFNLAKNEALTFL--DSFKTDF---EVDREVLLNVAKT 152
Query: 518 AMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLD--MIGIKKVPGWSS 652
++S+K+ + + + VVDA+L++ P P+D M+ I K+ S+
Sbjct: 153 SLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSA 199
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 86.2 bits (204), Expect = 5e-18
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P +K++V+H + ++ND ATI++ L++IHPAAK +VD + Q+ E+GD VV+
Sbjct: 48 PNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFT 107
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCAS 514
GE+L + + + G+ P + + A +E ++E A KI+ E++ L+K
Sbjct: 108 GELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKE---LIKAIR 164
Query: 515 TAMSSKLIHQQKDHFSKIVVDAVLSL---DTPLLPLDMIGIKKVPGWS 649
T +SSK + +D S +V A+L++ D +D I + K+ G S
Sbjct: 165 TCISSKQ-YGNEDFLSDLVAKAILTVLPKDPSKFNVDNIRVVKIMGSS 211
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHP----AAKTLVDIAKSQDAEVGDGTTSV 325
P + LI G I+ DG T+ + + + A+ + D+A + GDGTT+
Sbjct: 64 PKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTA 123
Query: 326 VILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 484
+L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 124 TVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 482 EQRDLL---LKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 604
EQ D L LKC +S+LI +H + + V SLDTP+
Sbjct: 571 EQSDTLRAALKCIGEVRNSRLITHYLEHGNLDIPPEVSSLDTPI 614
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +2
Query: 455 VKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 598
V ++N PE ++ + C+ ++ Q DH ++V + + L T
Sbjct: 486 VYLENNDPEVRKTASITCSQLFARDPILSQTSDHAIQVVAEVLEKLLT 533
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 152 WVPVXMDKLIVDHNGKAVISND 217
WVP+ ++ L+ D NGK + +D
Sbjct: 343 WVPLRINLLLPDENGKLKVCDD 364
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 371 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 505
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/71 (19%), Positives = 28/71 (39%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P + + + + N A+ + +L+ HPAA + + S + D + +
Sbjct: 245 PTDLPNIATTQHSLRYLDNASASAITVLERTHPAASSTMATESSHQSPSADSQAEELSKS 304
Query: 338 GEILKRLKPFV 370
+ K PFV
Sbjct: 305 QRVAKDDDPFV 315
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 356 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 505
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -2
Query: 438 FSMASLDAVLTALIRTRG*TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAIST 271
F+ + + +T+L+ + SS++ +L S A +T+ SPTS+S A+S+
Sbjct: 71 FTSPASSSFITSLVSSSS-QQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSS 125
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 25.4 bits (53), Expect = 9.8
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 332 LAGEILKRLKPFVEEG--VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 505
+ G++L++LKP +E+G + ++A + ++I A DLLL
Sbjct: 167 VVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIRNFSGAA------------DLLLD 214
Query: 506 CASTAMSSKLIHQQKDHFSKIVVDAVLSLD 595
C ST S++L+ D V+ +SLD
Sbjct: 215 CMSTFSSTELL-PYYDVVRYAVISGAISLD 243
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 634 LLDSNHVERQKWSVQRQDSINNNLREVI 551
L DSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 392 VLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIV 571
VLI + L +I Q ID DL+ AS A S+ ++++ + S+++
Sbjct: 221 VLIFDSKIIKFLPNSQIDAQLASIDKSIDGSVADLIQARASIAQRSEFLNEELEQLSQVL 280
Query: 572 VDAV 583
AV
Sbjct: 281 NQAV 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,078,644
Number of Sequences: 5004
Number of extensions: 60530
Number of successful extensions: 192
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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