Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L20
(820 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 124 9e-29
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 108 5e-24
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 91 8e-19
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 83 3e-16
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 42 6e-04
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 41 0.001
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 39 0.006
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 35 0.091
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_58467| Best HMM Match : 7tm_1 (HMM E-Value=3.6e-10) 29 6.0
SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 28 7.9
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 28 7.9
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 28 7.9
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 124 bits (299), Expect = 9e-29
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +2
Query: 158 PVXMDKLIVD--HNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVI 331
P MDK++ NG ++NDGATI+K + I +PAAK LV+++K QD EVGDGTTSV +
Sbjct: 42 PKGMDKILQSFGQNGNIQVTNDGATILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTV 101
Query: 332 LAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCA 511
L E+LK + V +HP+ ++ R + + A EK E A + PE+ R+ L+ A
Sbjct: 102 LTSELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAAVDHSSDPEKFREDLMNIA 160
Query: 512 STAMSSKLIHQQKDHFSKIVVDAVLSL 592
T +SSK++ Q +DHF+K+ VDAVL L
Sbjct: 161 RTTLSSKILVQHRDHFAKLAVDAVLRL 187
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 108 bits (260), Expect = 5e-24
Identities = 53/146 (36%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P MDK++V +G+ ++NDGATI+ ++++ H AK +V+++KSQD E+GDGTT VV+LA
Sbjct: 52 PKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELSKSQDNEIGDGTTGVVVLA 111
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN-KSPEEQRDLLLKCAS 514
G +L+ + ++ G+HP + A+++A+E + A DN ++ ++ L++ A
Sbjct: 112 GALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIA---DNFPVDKDNKESLIQTAM 168
Query: 515 TAMSSKLIHQQKDHFSKIVVDAVLSL 592
T + SK++ + ++I VDAVLS+
Sbjct: 169 TTLGSKIVSRCHRPLAEIAVDAVLSV 194
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 91.5 bits (217), Expect = 8e-19
Identities = 47/105 (44%), Positives = 67/105 (63%)
Frame = +2
Query: 278 IAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAV 457
++K QD EVGDGTTSV +LA E+LK + V +HP+ ++ R + + A EK E A
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAA 60
Query: 458 KIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 592
+ PE+ RD L+ A T +SSK++ Q +DHF+K+ VDAVL L
Sbjct: 61 VDHSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRL 105
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/125 (38%), Positives = 77/125 (61%)
Frame = +2
Query: 245 IIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASR 424
I HP A + +A +QD GDGTTS V++ GE+LK+ +V EG+HPR++ A +
Sbjct: 171 IQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKK 230
Query: 425 LAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 604
A+E ++E VK+ S E RD L+ A T++ +K+ + D +++VVDAVL++ P
Sbjct: 231 KALEVLEE--VKV---SREMDRDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIRKPK 285
Query: 605 LPLDM 619
P+D+
Sbjct: 286 KPIDL 290
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/82 (46%), Positives = 61/82 (74%)
Frame = +2
Query: 206 ISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVH 385
++NDG I++ + + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 386 PRVLIRAVRTASRLAIEKIKEQ 451
P +I A R A I+ +K+Q
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQ 82
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAE 301
P MDKLIVD GKA ISNDGATI+ LLDI+HPAAKTLVDIAKSQDAE
Sbjct: 677 PRGMDKLIVDGRGKATISNDGATIINLLDIVHPAAKTLVDIAKSQDAE 724
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 58 LREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRG 165
L+EGTD +QG PQL+SNI+ACQ + DAVRTTLGPRG
Sbjct: 644 LKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRG 679
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 82.2 bits (194), Expect = 5e-16
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = +2
Query: 428 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLL 607
AI++IKE AV + E R LL +CA+TA+SSKLI QK+ F+K+VVDAV+ LD LL
Sbjct: 1 AIKRIKELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLD-ELL 59
Query: 608 PLDMIGIKKVPG 643
PLDMIG+KKV G
Sbjct: 60 PLDMIGMKKVSG 71
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 630 RRFPGGALEDSXLVPGVAFXKTFSYAGFEMXPKTYKDC 743
++ GGALEDS L+ GVAF KTFSYAGFEM PKTY C
Sbjct: 67 KKVSGGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHC 104
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/71 (47%), Positives = 53/71 (74%)
Frame = +2
Query: 239 LDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 418
+ + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 419 SRLAIEKIKEQ 451
I+ +K+Q
Sbjct: 269 MDDMIDILKQQ 279
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 488 RDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 592
RD ++ A+TA+SSKLI QQ D F+ ++VDAV+++
Sbjct: 10 RDCIVSAANTALSSKLIGQQGDFFANMIVDAVMAV 44
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILA 337
P +D ++ +G +I+N G+ I++ L + +P + +V+ A+S G G + +I+
Sbjct: 22 PNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARSLSGRTGSGASYFIIIL 81
Query: 338 GEILKRL 358
EI + +
Sbjct: 82 AEIFREI 88
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDIIHP----AAKTLVDIAKSQDAEVGDGTTSV 325
P + +I G I+ DG T+ K +++ A+ + D+A + + E GDGTT+
Sbjct: 89 PKGKNVIIEQSFGGPKITKDGVTVAKAIELKDKYQNIGARLVQDVANNTNEEAGDGTTTA 148
Query: 326 VILAGEILKRLKPFVEEGVHPR 391
+LA I V +G +P+
Sbjct: 149 TVLARSIATEGFLHVSKGANPQ 170
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 34.7 bits (76), Expect = 0.091
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 158 PVXMDKLIVDHNGKAVISNDGATIMKLLDII 250
P MDK+I NG I+NDGATI KL+D +
Sbjct: 46 PKGMDKMIQGGNGDVTITNDGATI-KLIDTV 75
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 31 AKCNRKYFYLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRG 165
AK R + D+ + + ++NI A + V DA+RT+LGP+G
Sbjct: 4 AKAGRNQSHKTAFKDKEKPQEIRMTNITAAKAVADAIRTSLGPKG 48
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 338 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 451
GE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 39
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -2
Query: 381 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAISTRVLAAG*MISSSFMIVAPSFDIT 202
TP+++N F + T V+P PTSAS S+ I+++ V PS T
Sbjct: 447 TPTASNAFTETTTVTSTTTITVLPQPTSASSSITPSSTPATGTATIATATYSVPPSVAPT 506
Query: 201 A 199
A
Sbjct: 507 A 507
>SB_58467| Best HMM Match : 7tm_1 (HMM E-Value=3.6e-10)
Length = 340
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 506 CASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVP 640
C+ST SS IHQ+ S ++V ++ L L + ++ +KKVP
Sbjct: 19 CSSTERSSASIHQEVWLVSLLLV-VIIGLSLNLSVISLVMMKKVP 62
>SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 410 RTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVD 577
RTA + I + + +S +E LL+C ++SK QK++ +KI++D
Sbjct: 50 RTAENSSYPSIASEISSVARESRDED---LLRCDEVTINSKDEETQKENGNKIIID 102
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 169 GQADCRSQWKGGYIKRWCNDHEATGYHSPC 258
G DC W GG +C H + H C
Sbjct: 1128 GSKDCHDGWYGGTCSIYCLPHNGSSGHYDC 1157
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 191 CDLQSACPXPRGPRVVLTASTTS 123
C S+CP P PRV TA T S
Sbjct: 846 CPAGSSCPTPSSPRVPCTAGTYS 868
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 190 QWKGGYIKRWCNDHEATGY-HSPCR*NSCGYC 282
+WKG WCND + Y CR +CGYC
Sbjct: 817 KWKG---YGWCNDGDHDKYMEEVCR-KTCGYC 844
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,615,936
Number of Sequences: 59808
Number of extensions: 486901
Number of successful extensions: 1328
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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