Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L19
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 165 3e-41
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 0.79
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 31 1.0
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 31 1.4
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 30 1.8
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 3.2
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical p... 28 7.3
Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical p... 28 7.3
Z35639-2|CAA84694.1| 351|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 28 9.7
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 9.7
AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 165 bits (402), Expect = 3e-41
Identities = 85/183 (46%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
Frame = +2
Query: 200 KPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKA 379
+P T+++AM K + ++ + ++ AAK+ +KK K + E K ++KA
Sbjct: 21 QPLATLVQAML-ISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAE-VKKLEKAGC 78
Query: 380 EEENTEKRSQN-LDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRRQGK 556
E+ E+ L+EAKKI D SLP+A V+KI E+ +HR QR+ I+ WVHRLRRQGK
Sbjct: 79 REKEAEEAQHAALEEAKKITFSLDKSLPEAKVIKIGESVQHRDQRVSIKAWVHRLRRQGK 138
Query: 557 SLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLXAVPEGXKAPGGHXLTX 736
SL FL LRDG G+LQCVL+ LCQ+Y+A+ LSTE+SV +YG + A+P+G AP GH LT
Sbjct: 139 SLMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSVQVYGIIKALPDGKSAPDGHELTV 198
Query: 737 DXW 745
D W
Sbjct: 199 DYW 201
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.79
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 269 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA-KAEEENTEKRSQNLDEAKKILLQE 445
D K D KD K + KK K +E K K K EE+ EK+ + E KK +E
Sbjct: 152 DKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKE 211
Query: 446 D 448
D
Sbjct: 212 D 212
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 269 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 448
D K + K D K + KK +K ++ K +K K EE+ EK+ + ++ KK+ +
Sbjct: 163 DEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEK-KEEEKKEEKKEEKKEDEKKV--EPK 219
Query: 449 PSLPK 463
P PK
Sbjct: 220 PGEPK 224
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 597 YSAFYM-VYYVRPTML*SYLRSHLWSCM 677
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 597 YSAFYM-VYYVRPTML*SYLRSHLWSCM 677
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 108 STCRTLETLACPRYIPRIRMAMTIQVMVRKKNH 206
S CR +E +ACPR P+I M+ T + V + H
Sbjct: 404 SNCRKVEVIACPR-DPKIEMSRTRWITVGPRGH 435
>Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 597 YSAFYM-VYYVRPTML*SYLRSHLWSCM 677
YS F + +YY PT L SY+ + WSC+
Sbjct: 629 YSTFQLFMYYAVPTTLLSYIFAFFWSCL 656
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 374 KAEEENTEKRSQNLDEAKKILLQEDPSL 457
K +EE TEK+ + E++K +L+ED +L
Sbjct: 160 KTDEEGTEKKEPTMTESRKEMLREDDTL 187
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 275 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 454
K++ KD + ++ KKI + E DK EE EK+ L ++KK L+ED +
Sbjct: 123 KNEEKDAEAPVENDDKKISE----EGINKTDKT--EEPELEKKKSELSDSKKERLREDDT 176
Query: 455 L 457
L
Sbjct: 177 L 177
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 597 YSAFYM-VYYVRPTML*SYLRSHLWSCM 677
YS+F + +YY PT + SY+ + WSC+
Sbjct: 622 YSSFQIFMYYAVPTTVLSYIFAFFWSCL 649
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 344 RENYKAMDKAKAEEENTEKRSQNLDEAK---KILLQEDPSLPKATVVKICETTEHRGQRI 514
+EN K D+ + ++ ++KRSQNLDE + K LL + L + + + E + + +
Sbjct: 852 QENTKLRDELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQLHNLLTRDYDEAKKESM 911
Query: 515 CIRGWVHRLRRQ 550
+R V + RQ
Sbjct: 912 ELRQKVQNIPRQ 923
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 200 KPFKTILKAMHHAGKEPFPTIYVDSKDDTK 289
K F+T LK HHA P Y+ SK D K
Sbjct: 411 KNFETALKTSHHAFNLPEKNEYIPSKFDQK 440
>Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical
protein T21C12.4b protein.
Length = 211
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 308 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 487
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 141 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 200
Query: 488 TTEHRGQRIC 517
+++RG ++C
Sbjct: 201 NSKNRG-KVC 209
>Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical
protein T21C12.4a protein.
Length = 192
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 308 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 487
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 122 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 181
Query: 488 TTEHRGQRIC 517
+++RG ++C
Sbjct: 182 NSKNRG-KVC 190
>Z35639-2|CAA84694.1| 351|Caenorhabditis elegans Hypothetical
protein D2045.5 protein.
Length = 351
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 239 GKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIW 340
G+E F + + K DY VA K Q+ K KIW
Sbjct: 305 GEEMFTALSISEKRAPNDYKVATKMQMAK--KIW 336
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 266 VDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEK-----RSQNLDE-AK 427
++ +DD+++ + S LKK + + N + + ++EN +K ++NLD
Sbjct: 675 IEEEDDSENNETVVPSTLKKRTVVRMEHNAEVFREQDEDDENQDKDTVAPSAENLDSPPS 734
Query: 428 KILLQEDPSLPKAT 469
I L+ S+P A+
Sbjct: 735 DIPLETLSSIPSAS 748
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GYASEDGYIVSGAKVNLWHS*PCVMALGTYSAFYM-VYYVRPTML*SYLRSHLWSCM 677
G S YIV ++ W++ + YS F + +YY P + +Y+ + WSC+
Sbjct: 604 GKLSYCAYIVHFFLIS-WYTNISEAPMHYYSTFQVWIYYAVPVTIIAYIFAFFWSCL 659
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 308 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 478
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 479 ICE 487
CE
Sbjct: 69 KCE 71
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Frame = +2
Query: 236 AGKEPFPTIYVDSKDDTKDYDVAAK--SQLKKIQKIWVREN-----YKAMDKAKAEEENT 394
+GK TI +D D+ D + AAK S +I+ ++ A++KAK + E
Sbjct: 11 SGKRSLETITIDDSDEETDKEPAAKKPSNYTAWAEIFNKKKTESSAVSAIEKAKKDSEK- 69
Query: 395 EKRSQNLDEA-----KKILLQEDPSLPKATVVKICETTEHRGQRI 514
E++ Q L EA ++ L +P K V + + Q+I
Sbjct: 70 ERQRQKLREAIMERKRREALMNEPKKQKIEPVSTVKLEKSVNQKI 114
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 308 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 478
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 479 ICE 487
CE
Sbjct: 69 KCE 71
>AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical
protein R119.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 392 TEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 496
T +NLD QED LP+ K+C+ TE
Sbjct: 648 TSVGEENLDPMDYCTCQEDEILPEDPCFKVCDITE 682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,520
Number of Sequences: 27780
Number of extensions: 363139
Number of successful extensions: 1058
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -