Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L18
         (852 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    27   0.72 
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   2.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.1  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 599 VPYEVKVRVDKPYEVKVKVPTPYTVE-XKILTK*KCPXPALHCXEKGPXSSEXEVKVP 769
           VP+ VKV + +PY ++V V  P  +   K++ K     P  +  EK P   E E   P
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPK-VIEKPVPYTVEK-PYPIEVEKPFP 241



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 599 VPYEVKVRVDKPYEVKVKVPTPYTVEXKILTK*KCP 706
           VP+ V + V  P+ VKV +P PY ++  +    K P
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIP 211



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 611 VKVRVDKPYEVKVKVPTPYTVEXKILTK*KCPXP 712
           V   V+KPY ++V+ P P  V  K       P P
Sbjct: 224 VPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYP 257


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 388 AHQNC*GGKEGACSVYSRETRPLY 459
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 652  FDFDFVRLVNADLDFIRYFLFNGVRFRYVYWVFDVFLDGKGN 527
            F+F++  + N   +    F      F + YW  D F  GK N
Sbjct: 1552 FNFEYKDVSNYAKNLTYQFFDYARYFTFPYWNEDYFFQGKHN 1593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,739
Number of Sequences: 2352
Number of extensions: 11343
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)