Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L17
         (895 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1H8P3 Cluster: Putative uncharacterized protein; n=3; ...    36   1.8  
UniRef50_Q0E8U2 Cluster: CG9664-PA, isoform A; n=2; Drosophila m...    35   2.4  

>UniRef50_A1H8P3 Cluster: Putative uncharacterized protein; n=3;
           Burkholderiaceae|Rep: Putative uncharacterized protein -
           Ralstonia pickettii 12J
          Length = 294

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 308 RGAWRLGVCQHGRGC-EIHFRSVERSQAGKTKGRWHSIPACGCFRAG 445
           RGAW L V  HGR   ++  R+  +   GK KG  H  P  GC + G
Sbjct: 134 RGAWHLHVAMHGRPARQLAIRAWMKVCGGKGKGYCHIRPPKGCGKFG 180


>UniRef50_Q0E8U2 Cluster: CG9664-PA, isoform A; n=2; Drosophila
           melanogaster|Rep: CG9664-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 609

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 335 QHGRGCEIHFRSVERSQAGKTKGRWHSI-PACGCFRAGSLVEYNGESXTAARQELIMSVT 511
           Q  +  E+HF  V  S  G TKG    I  ACG F++G L    G S  A +  L+ ++ 
Sbjct: 16  QKQKALELHFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSG-AGKSTLLNALA 74

Query: 512 G 514
           G
Sbjct: 75  G 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,401,842
Number of Sequences: 1657284
Number of extensions: 8112015
Number of successful extensions: 21835
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21801
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)