Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L17
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro...    32   2.4  
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.     32   2.4  
BC044889-1|AAH44889.1|  462|Homo sapiens suppressor of variegati...    31   7.5  
BC019313-1|AAH19313.1|  347|Homo sapiens SUV420H2 protein protein.     31   7.5  
BC005842-1|AAH05842.1|  347|Homo sapiens SUV420H2 protein protein.     31   7.5  

>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
           protein rA9 protein.
          Length = 1649

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
 Frame = +3

Query: 273 FGDPLELDYF--SDEAPGDXXXXXXXXXXXXXXXXXXXHR----------QARRKAVGIP 416
           FGDP ELD F  S+E   +                   H+            RR    +P
Sbjct: 434 FGDPYELDPFDSSEELSANPLSPLSAKRRALSRSALQSHQPVARPVSVGLSRRRLPAAVP 493

Query: 417 SPPVAAS-APDLLSSIMESQXLLXAKNS*CXSPGDGXLEIKLXSPIA 554
            P +     PDLL SI+  Q LL   +S      DG L  K  +P++
Sbjct: 494 EPDLEEEPVPDLLGSILSGQSLLMLGSSDVIIHRDGSLSAKRAAPVS 540


>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
          Length = 1654

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
 Frame = +3

Query: 273 FGDPLELDYF--SDEAPGDXXXXXXXXXXXXXXXXXXXHR----------QARRKAVGIP 416
           FGDP ELD F  S+E   +                   H+            RR    +P
Sbjct: 439 FGDPYELDPFDSSEELSANPLSPLSAKRRALSRSALQSHQPVARPVSVGLSRRRLPAAVP 498

Query: 417 SPPVAAS-APDLLSSIMESQXLLXAKNS*CXSPGDGXLEIKLXSPIA 554
            P +     PDLL SI+  Q LL   +S      DG L  K  +P++
Sbjct: 499 EPDLEEEPVPDLLGSILSGQSLLMLGSSDVIIHRDGSLSAKRAAPVS 545


>BC044889-1|AAH44889.1|  462|Homo sapiens suppressor of variegation
           4-20 homolog 2 (Drosophila) protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = -2

Query: 444 PARKQPQAGMECQRPFVLPACERSTER-----KWISQPRPCWQTPSRQAPRPK 301
           P R+ P     CQ P  LPAC    +      +W+ QP+P  +   R+ PRP+
Sbjct: 291 PLRRDPFCAA-CQ-PLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPR 341


>BC019313-1|AAH19313.1|  347|Homo sapiens SUV420H2 protein protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = -2

Query: 444 PARKQPQAGMECQRPFVLPACERSTER-----KWISQPRPCWQTPSRQAPRPK 301
           P R+ P     CQ P  LPAC    +      +W+ QP+P  +   R+ PRP+
Sbjct: 176 PLRRDPFCAA-CQ-PLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPR 226


>BC005842-1|AAH05842.1|  347|Homo sapiens SUV420H2 protein protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = -2

Query: 444 PARKQPQAGMECQRPFVLPACERSTER-----KWISQPRPCWQTPSRQAPRPK 301
           P R+ P     CQ P  LPAC    +      +W+ QP+P  +   R+ PRP+
Sbjct: 176 PLRRDPFCAA-CQ-PLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPR 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,163,545
Number of Sequences: 237096
Number of extensions: 1437888
Number of successful extensions: 4285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4238
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)