Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L16
         (842 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +2

Query: 203 VFVLGILLGQVQNKNINLENRHETENHALKCPFSRLIEDI 322
           +F + + L   +NK   L++   T N A +C F + + ++
Sbjct: 6   LFCVLVTLATARNKAPLLDDGTRTRNKAAECVFGKQVREL 45


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +2

Query: 299 FSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRI 478
           FS L + +   + +TDK+ ++   E  + F+N  A++         E  +   +    R 
Sbjct: 143 FSILQQFVAIFNEETDKLVEVLKEECYKPFINVNAHVAQFTLKTIAETAMGTKLRFTTR- 201

Query: 479 KENITKGNTGVINEAIL 529
           KE I K +   + E +L
Sbjct: 202 KETIYKQSIVDMGEFLL 218


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +2

Query: 299 FSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRI 478
           FS L + +   + +TDK+ ++   E  + F+N  A++         E  +   +    R 
Sbjct: 143 FSILQQFVAIFNEETDKLVEVLKEECYKPFVNVNAHVAQFTLKTIAETAMGTKLRFTTR- 201

Query: 479 KENITKGNTGVINEAIL 529
           KE I K +   + E +L
Sbjct: 202 KETIYKQSIVDMGEFLL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,787
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)