Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L16
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 30 0.36
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 30 0.47
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.62
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 28 1.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 1.9
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 27 2.5
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 2.5
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 5.8
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 5.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 7.7
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 26 7.7
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 26 7.7
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 26 7.7
SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family protein|Schizosaccha... 26 7.7
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 26 7.7
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 368 REKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENI 490
REK +F+ +A++T S ++ + D++ SIN I++++
Sbjct: 809 REKMSVFMARLASLTKSELFSEECASLEDVLESINNIEDDV 849
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 29.9 bits (64), Expect = 0.47
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 431 KQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTN 610
+QEE + I AS+ R K NT + + +LLD +N IE + D KN+ N
Sbjct: 164 EQEESLGGIEASVQRQKRMGYAMNTELSEQNVLLD---NMNNDADRIERRFD-HAKNRLN 219
Query: 611 KI 616
K+
Sbjct: 220 KV 221
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 0.62
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 257 ENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKD-REKTRLF 388
E +H ++ H+L F L+ + F+IHN K +L++ EK RL+
Sbjct: 2968 EKQHSSDTHSLANSFV-LLANEFYIHNAKIKQKELEEIEEKNRLY 3011
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 455 IIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKS---S 625
+ + + R+ + +G V N I + ++ I+E+++ K + +I++ S
Sbjct: 9 LTSRLPRLSTLVVRGYASVANTGI---EASNTSENNLNIQEQLNDNDKKRLKQIRNIGIS 65
Query: 626 NERDKGKTTTTERTKY 673
D GKTT TER Y
Sbjct: 66 AHIDSGKTTFTERVLY 81
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 1.9
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Frame = +2
Query: 341 TDKITQLKDREKTRLFLNTMANITNSNSD-KKQEELINDIIASINRIKENITKGNTGVIN 517
T++ L E R +ANI +S S+ K+Q E + AS+ +I +
Sbjct: 870 TERAIALDKEEILRRTQERLANIEDSFSETKQQNENLQRESASLKQINNEL--------- 920
Query: 518 EAILLDKPIKVNQI---KSGIEEKIDVQTKNQTN-KIKSSNERDKGKTTTTERTKYVE 679
E+ LL+K KV + ++ ++EK+ ++ K+ + K + + R+ T +E+ ++ E
Sbjct: 921 ESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNE 978
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 428 KKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQT 607
KK +++ ++ +I K+ K + + + I + K NQIK EEK+ ++ + Q
Sbjct: 44 KKYDQIESEYKTNIENEKKAFIK-DVSQVQQKIKEFEIQKANQIKQLNEEKLSIEARKQQ 102
Query: 608 NKIKSSNE 631
+I+ N+
Sbjct: 103 LEIEIRNQ 110
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 98 TRELCLLLKTAVYLPAAVWSRPR 30
T+E L T++Y+P +WS+PR
Sbjct: 306 TKEHFAHLSTSLYVPEVMWSKPR 328
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 26 YNAVGTRPPPGDKLLSLITNTIRGSFTRHL 115
Y+ GT+P P + L L N I S T H+
Sbjct: 731 YSGAGTKPSPKNDLNVLTNNLIPYSLTDHI 760
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 269 ETENHALKCPFSRLIEDIFH-IHNKTDKITQLKDREKTRLFL---NTMANITNSNSDKKQ 436
ET NHA +L ED + +T+ ++ F N +AN+ N S K
Sbjct: 410 ETCNHAYNTMLCKLTEDTSSFLKRQTEMLSHSPASSHWASFSSLENEIANLKNLLSKMKS 469
Query: 437 EELINDIIASINRIK 481
EL D+ S R+K
Sbjct: 470 TELFLDMEFSYGRLK 484
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 72 DSSLSPGGGLVPTALYGCF 16
D LS G GL+P ALY F
Sbjct: 177 DGILSEGAGLIPRALYQLF 195
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 236 QNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANITN 415
Q +N N++ H TEN+ L+ ++ I HNK L++ R L ++ + N
Sbjct: 320 QKENANVDANHATENN-LEGQATQKSVSILKGHNKALSNVSLQEDHGKRRNLKSLRSSRN 378
Query: 416 --SNSDKKQEELINDIIASINRIK 481
S K +E + ++++++K
Sbjct: 379 LHQQSRKSLDENKPNSFSNVSKLK 402
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 7.7
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 416 SNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIK-VNQIKSGIEEKIDVQ 592
S S EL D+I+S + I + TG+ + + D+ + V+ + + + +
Sbjct: 235 SRSSDTTTELSKDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSK 294
Query: 593 TKNQTNKIKSSNERDKGKTTTTERTKYVEI 682
+ + +++K S RD K+ + +K V +
Sbjct: 295 VQEEISRLK-SELRDLEKSGGSSNSKPVVV 323
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 637 IPLITGFDFVSLIFCLYVYFLLNAAFN 557
+P ITG+D++SL+ YV+ LL N
Sbjct: 338 LPQITGYDYMSLV--SYVHLLLKCLEN 362
>SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 7.7
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 302 SRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASI--NR 475
S L+ I HN K LK + K ++ ++ N+D K+ N IA + N
Sbjct: 253 SYLVLFIVFYHNTYKKNAALKMKAKAAAATKGNSSESSKNADLKRLSKSNASIAEVKCNN 312
Query: 476 IKENITKGNTGVINE 520
I N+ ++G+ NE
Sbjct: 313 IVTNLYPISSGLNNE 327
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 611 C*SDFLFVRLFSPQCRF 561
C S F +RLFSPQC F
Sbjct: 25 CFSFFFELRLFSPQCLF 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,856,173
Number of Sequences: 5004
Number of extensions: 55287
Number of successful extensions: 177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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