Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_L16
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233...    30   2.7  
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993...    29   3.5  
12_01_0914 + 8901915-8902574                                           29   6.1  
11_06_0123 + 20334350-20334553,20335059-20335490,20336052-203361...    29   6.1  
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    29   6.1  
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867...    28   8.1  
04_04_1489 - 33938426-33939363,33939429-33939813                       28   8.1  

>08_02_0746 +
           20721421-20721649,20722912-20722971,20723318-20723377,
           20723458-20723553,20723764-20723871,20724037-20724090,
           20724275-20724414,20724499-20724570,20724642-20724692,
           20724943-20725017,20725205-20725585,20726372-20727604,
           20727679-20727831
          Length = 903

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 404 NITNSNSDKKQEELI-NDIIASINRIKENITKGNTGVIN 517
           N  N NS+  Q+ELI  DI   +   +E  TKGN   I+
Sbjct: 336 NNPNDNSETNQQELIEEDINIFVENEQEEATKGNNAAID 374


>01_07_0122 -
           41196081-41196205,41197561-41198245,41198961-41199329,
           41199405-41199514,41200539-41200833
          Length = 527

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 323 FHIHNKTDKITQLKDREKTRLFLNTMANI 409
           F I+   D+I +LKD+ KT L LN+  N+
Sbjct: 232 FPIYKVQDRIDELKDQMKTGLLLNSYENL 260


>12_01_0914 + 8901915-8902574
          Length = 219

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +2

Query: 449 NDIIASINRIKENITKGNTGVINEAILLDKP-IKVNQIKSGIEEKIDVQTKNQTNKIKSS 625
           ND+     +  E  +     V  +A + DK   KVN+    +EE+I +  +   + +   
Sbjct: 112 NDMYKLKKKEMEEASPSKKCVALQAEVEDKSKSKVNEANDNLEEEIALLDRRFNDLLGRR 171

Query: 626 NERDKGKTTTTERTK 670
            ER KG  ++T R +
Sbjct: 172 KERGKGSNSSTRRNR 186


>11_06_0123 +
           20334350-20334553,20335059-20335490,20336052-20336191,
           20336281-20336401,20337110-20337250,20337421-20337663
          Length = 426

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/89 (17%), Positives = 37/89 (41%)
 Frame = +2

Query: 431 KQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTN 610
           ++ +   + ++ ++   E++  G         + DKP+      +  +   D +  +   
Sbjct: 54  RERQATREALSLLDSFYEDLVDGKGSDGKPKSIPDKPLNKKITFADSDSSDDEEEDHSGE 113

Query: 611 KIKSSNERDKGKTTTTERTKYVEILXIEP 697
               +N  DKG+TT +E+ K V    + P
Sbjct: 114 VTDDTNNADKGETTPSEQQKEVSDTPVVP 142


>08_02_1091 + 24256025-24256190,24256806-24257978,24258066-24258733,
            24258994-24260065,24260241-24260563,24260647-24260835,
            24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 326  HIHNKTDKITQLKDREKTRLFLNTMANITNSN-SDKKQEELINDIIASINRIKENITKGN 502
            H  N  +  +Q KD + T +  NT+  + N   SD+K E     + +  N +K  +  GN
Sbjct: 1121 HAGNSREDASQ-KDPDDTEIRKNTVRVVINQLLSDEKTESFPILVTSGSNNVKAVVADGN 1179

Query: 503  TG 508
            +G
Sbjct: 1180 SG 1181


>11_04_0307 +
           16185405-16185713,16185847-16185942,16186626-16186730,
           16186938-16187090,16188395-16188478,16188566-16188694,
           16188986-16189165,16189555-16189677,16189678-16189794,
           16189889-16190053
          Length = 486

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 588 YKQKIRLTKSNPVMRGIKAKLLQRKELNTLKYXL 689
           YK +  L  S  + R  ++KLL++KELN+ K  L
Sbjct: 162 YKDEFLLNPSEKIRRFEESKLLRKKELNSDKIGL 195


>04_04_1489 - 33938426-33939363,33939429-33939813
          Length = 440

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 428 KKQEELINDIIAS-INRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQ 604
           KK E L+  +I S ++R+      G +  +   +      KVN++   +EE++   T+  
Sbjct: 98  KKYETLVTMLINSDMSRMTPASLLGRSTPMTSEVEDKSKSKVNEVNEDLEEEMVFLTRRF 157

Query: 605 TNKIKSSNERDKGKTTTTERTK 670
            + +    ER +G  +   R +
Sbjct: 158 NDLLGRRKERGRGSNSNRRRNR 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,925,091
Number of Sequences: 37544
Number of extensions: 298635
Number of successful extensions: 698
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)