Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L16
(842 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8) 34 0.17
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 33 0.38
SB_19059| Best HMM Match : Arm (HMM E-Value=0.044) 32 0.51
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 31 1.2
SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13) 31 1.5
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 31 1.5
SB_57076| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_29189| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 29 4.7
SB_15220| Best HMM Match : VAR1 (HMM E-Value=3) 29 4.7
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 29 6.2
SB_19395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_12732| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 8.2
SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) 28 8.2
SB_42149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8)
Length = 279
Score = 33.9 bits (74), Expect = 0.17
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Frame = +2
Query: 407 ITNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKID 586
I SD K +E+ + S N K T+ + A+ DKP K + + E+K+
Sbjct: 56 IAKKASDNKPQEVTQQVGDSKND-KPQETRSTVKTVKPAVTEDKPKKKKEKSAVKEDKVT 114
Query: 587 VQTKNQTNKIKSSNER--------DKGKTTTTERTK 670
+ +N +K E+ DKGK T +T+
Sbjct: 115 KKGRNPVSKADKPKEKATIATKKADKGKKTVERKTR 150
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 33.1 bits (72), Expect = 0.29
Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Frame = +2
Query: 236 QNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKD--REKTRLFLNTMANI 409
+N N ++ NR+ T N+++ S + + I+N I N ++I
Sbjct: 1759 RNNNNSINNRNNTNNNSINNNNSSINNNNSSINNNNSSIINNNSSINNNNSSINNNNSSI 1818
Query: 410 TNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKID- 586
N+NS N+ +SIN +I N+ +IN ++ N +
Sbjct: 1819 INNNSSN------NNNNSSINNNNSSIINNNSSIINNNSSINNRNNTNNNSINNRSNTNN 1872
Query: 587 --VQTKNQTNKIKSSNERDKGKTTTTERTKY 673
+ ++ TN+I SS+ + ++ ++
Sbjct: 1873 NSINNRSNTNRINSSSNNNDNSDNKSKHQEH 1903
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +2
Query: 338 KTDKITQLKDREKTRLFLNTMANI-TNSNSDKKQEELINDIIASINRIKENIT-KGNTGV 511
K + T D+ K + T ++ T++N+ + + N N + IT K
Sbjct: 874 KKEADTNASDKNKDVDVITTSGDVATSANATLNKTKETNPSSVETNVPNDTITEKEEQKT 933
Query: 512 INEAILLDKPIKVN-QIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTTER 664
INE +K I ++ + +S +EK+ + ++NKI+++ DK K E+
Sbjct: 934 INEKNSNEKAISLDTKEESDSQEKVGEAAQPESNKIEATASSDKKKDLAAEK 985
>SB_19059| Best HMM Match : Arm (HMM E-Value=0.044)
Length = 603
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +2
Query: 395 TMANITNSNSDKKQEELINDIIASINRIKENITKGNTGVI 514
T+ +++N+NSD ++E L D + ++ ++ E + K TGV+
Sbjct: 329 TLKHLSNTNSDAQRELLSLDTVQALAKVLEAVCKDVTGVV 368
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 31.5 bits (68), Expect = 0.89
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Frame = +2
Query: 236 QNKNIN-LENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKDREKTRLFLNT-MANI 409
++ NI+ L + +E E A +L+ + K+ I +L + L +T + +
Sbjct: 1617 KSTNIDKLVSNNEVEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNEVELAKSTNIDKL 1676
Query: 410 TNSNSDKKQEELIN-DIIASINRIK-ENITKGNTGVINEAILLDKPIKVNQIKSGIEEKI 583
++N D+ + N D + S N ++ T + V N + L K ++++ S E +
Sbjct: 1677 VSNNEDEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNGVELAKSTNIDKLVSNNE--V 1734
Query: 584 DVQTKNQTNKIKSSNERDKGKTTTTER 664
++ NK+ S+NE + K+T ++
Sbjct: 1735 ELAKSTNINKLVSNNEVELAKSTNIDK 1761
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 31.1 bits (67), Expect = 1.2
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Frame = +2
Query: 230 QVQNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKIT-QLKDREKTRLFLNTMAN 406
+++N+ + + R E E +LK +LI I K D T +KDRE T L L T
Sbjct: 137 RIENETLKRKLRKEKEKLSLK---EKLI---LEIQKKLDVTTIAVKDRETTILKLETALQ 190
Query: 407 ITNSNSDKKQEELI---NDIIASINRIK--ENITKGNTGVINEAILLDKPIKVNQIKSGI 571
D + EL+ N + A + RI E+ +T + E ++ +KV K +
Sbjct: 191 DLQVKFDSNRTELVKYQNQVNADLKRIDHLEHELMISTKTVEEHVITINEMKVG--KDQL 248
Query: 572 EEKI-DVQTKNQTNK 613
++ + +++ K+Q +
Sbjct: 249 QDSLYELKRKHQAQE 263
>SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13)
Length = 725
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 392 NTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKV--NQIK- 562
N ++ +++Q +L+ I+ N K+ + K N + + ++ + NQ K
Sbjct: 621 NKKLKAQKNDENEEQTQLLQSILNDANERKDQLEKENRSLNQRIMEMESEVDDLRNQQKA 680
Query: 563 --SGIEEKIDVQTKNQTNKIKSSNER 634
S + ++D++ K+ +K+K +NE+
Sbjct: 681 HASDQDSELDIKYKDHLDKLKEANEQ 706
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 338 KTDKITQL-KDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGVI 514
+ D I QL ++ + ++ N A+ TNSNS++K E+++N N+ ++N K N+G
Sbjct: 92 QVDDIPQLERNSDSEQMVNNNHADDTNSNSEEKFEQIVN------NK-QDNERKSNSGQT 144
Query: 515 NEAI 526
+E +
Sbjct: 145 SEQL 148
>SB_57076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 458 IASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEK 580
I +I RI++ + + N + A + KP N + SGI+EK
Sbjct: 108 IRNIGRIRKYLDRNNCEQLIHAFITSKPDACNSLLSGIQEK 148
>SB_29189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +2
Query: 419 NSDKKQEELINDIIASINRIKENIT-KGNTGV---INEAILLDKPIK-VNQIKSGIEEKI 583
+S K+Q++L+ + ++ N KG +N I D+ I+ +Q IE
Sbjct: 314 HSKKEQKQLLENQTQVVSDPGWNAEIKGTASAYFQVNNEIQQDENIESTSQKDENIESTC 373
Query: 584 DVQTKNQTNKIKSSNERDKG-KTTTTERTKYVEI 682
T Q IKS++++DK K+T+ + K V++
Sbjct: 374 QKSTSQQDKNIKSTSQQDKNIKSTSQQEVKGVDM 407
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 29.9 bits (64), Expect = 2.7
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 14/167 (8%)
Frame = +2
Query: 176 EMEILRFKHVFVLGILLGQVQNKNINLENRHETENHALKCPFSRLIEDIFHIHNK-TDKI 352
EME K V L LGQV+ N L R+ +N L+ L E + N +++
Sbjct: 811 EMETNHSKAVQNLEAKLGQVKQHNECLSTRYTQQNSELRAQIKLLEEHLKSATNALKNEM 870
Query: 353 TQLKDRE-------------KTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENIT 493
T+ K+ E K L T N+ + E ++ D +I ++ +
Sbjct: 871 TRCKELEKDLCQREQECAALKCELTQQTTGQNGTQNNKRSYEAIVKDQTGTIMHLQAALE 930
Query: 494 KGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNER 634
K + +LLD + + KS E +I K NK + ER
Sbjct: 931 KERQE--KQKVLLDS-LSPDSQKSR-EREIQQAVKRAVNKERLEKER 973
>SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +2
Query: 359 LKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDK 538
+ DR KT F + I+ K+ D + + + ++ + + NE+ LL
Sbjct: 1 MNDRPKTISFSAEVPEISGDQPYKETGSA--DFASGSGSLDKGVSWISANLRNESTLLSS 58
Query: 539 PIKVNQIKSGIE------EKIDVQTKNQTNKIKSSNERDKGK 646
I V +I I+ ++ T+N+ NK K + D+GK
Sbjct: 59 KIPVPEITESIDFASGSIREVPSSTENKGNKNKILEKNDQGK 100
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 548 VNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTTERT 667
V K G ++K ++KN + I+ + R+K K T E+T
Sbjct: 411 VENEKKGTKDKTKKKSKNNSKNIEEEDGREKPKETRIEKT 450
>SB_15220| Best HMM Match : VAR1 (HMM E-Value=3)
Length = 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/100 (22%), Positives = 42/100 (42%)
Frame = +2
Query: 329 IHNKTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTG 508
+HNKT Q ++ L ++ ++N N +K E L D ++ +N K
Sbjct: 9 VHNKTRVNNQNYEKNNEALRVDNTTRVSNQNYEKNNEALCVDNKTRVD--NQNYEKN--- 63
Query: 509 VINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSN 628
NEA+ +D +V E+ + + T ++ + N
Sbjct: 64 --NEALCVDNTTRVT--NQNYEKNNEALCVDNTTRVSNQN 99
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 419 NSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEK 580
N DK + I+ +I RI++ + + N + A + K N + SG++EK
Sbjct: 268 NPDKTEIVHISSRFTNIGRIRKYLDRNNCEQLIHAFITSKLDACNSLLSGLQEK 321
>SB_19395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 410 TNSNSD--KKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKI 583
TN NS K+ + I ++ + + NT + + LD P K Q +G +E +
Sbjct: 417 TNMNSSICSKEPQEIKEVQKTATPDSVVMATVNTDRQDVEVELDAPNKSPQAGNGFQEDV 476
Query: 584 DVQTKNQTNKI 616
++T+N T+++
Sbjct: 477 TMETENVTSRV 487
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/137 (18%), Positives = 58/137 (42%)
Frame = +2
Query: 230 QVQNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANI 409
Q+QNKN+ LE +E + K +IE + +D++ + ++ +N
Sbjct: 318 QLQNKNLELEYEYEQKAKIEKERDKLVIE----VERLSDEMKKAGLPKEVLSLMNDAREE 373
Query: 410 TNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDV 589
S + K E+ +++ + ++E +K +E L+ +K Q+ S E
Sbjct: 374 KRSENLSKMEKKLSETQEKLQDMEEKFSKEKRAWADEVESLETDVKSLQLISDESESKLR 433
Query: 590 QTKNQTNKIKSSNERDK 640
+ ++ + + N + K
Sbjct: 434 EAQSSLREYREENRKLK 450
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 28.7 bits (61), Expect = 6.2
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Frame = +2
Query: 230 QVQNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANI 409
Q++ + +LEN + E L L ED+ + K D++ + R+ I
Sbjct: 691 QLREELADLENAKQLEERQLLARIETLEEDLSRLSVKNDELD-----KAIRICSKEKEGI 745
Query: 410 TNSNSDKKQEELINDIIASINRIKENITKGNTGVIN--EAILLDKPIKVNQIKSGIEEKI 583
+S + D IAS+ + +K I EA L K V+++KS ++ +
Sbjct: 746 EDSLKHAR------DQIASLESSSTDASKKLRAEIKILEAQLKQKSQTVDELKSTMDTLM 799
Query: 584 DVQTKNQTNKIKSSNERDK 640
D +K + +K K + DK
Sbjct: 800 DSASKLEEDKRKIQQQADK 818
>SB_12732| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 800
Score = 28.3 bits (60), Expect = 8.2
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Frame = +2
Query: 179 MEILRFKHVFVLGILLGQVQNKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQ 358
M + F+ + +L L + N I L+ H A +S+ +I +
Sbjct: 1 MVVRLFEFLLLLPFLFPK--NGVIALKLSHPVSELAYAGSYSQNDMEIPEFYRNNRHEND 58
Query: 359 LKDREKTRLFLNTMANITNS------NSDKKQEEL-INDIIASINRIKENITKGNTGVIN 517
+D E R++L+ N NS ++ + I D++++++ ++NIT TG I
Sbjct: 59 PRDTELRRIYLSPNKNSRTLVLRRILNSKTSEDRIKIRDVVSNLSERRKNITSKKTGKIM 118
Query: 518 EAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNER 634
E + I +N I + +E Q K ++K+ S +R
Sbjct: 119 EDVPRRYVIVLN-IGTNQKEFSLYQEKAFSSKLSQSLKR 156
>SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)
Length = 605
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 458 IASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSN 628
I +I RI++ + + N + A + K N + SG++EK + QT + + +N
Sbjct: 546 IRNIGRIRKYLDRNNCEQLIHAFITSKLDACNSLLSGLQEKKNSQTTACSELCRKTN 602
>SB_42149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 299 FSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMAN-ITNSNSDKKQEE 442
F+ L E++F K K+ Q K+R F T++ +TNS S KK+EE
Sbjct: 21 FANLPEEMF---TKIRKVRQQYSYPKSRRFWWTLSERLTNSTSIKKEEE 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,448,922
Number of Sequences: 59808
Number of extensions: 379206
Number of successful extensions: 1024
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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