Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L16
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 31 0.78
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 1.4
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF024492-8|AAF98620.1| 336|Caenorhabditis elegans Serpentine re... 30 2.4
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 30 2.4
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 29 3.1
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 29 4.1
Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81057-2|CAB02915.1| 127|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 29 5.5
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 29 5.5
Z92813-5|CAB07285.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132872-2|CAB60761.2| 119|Caenorhabditis elegans Hypothetical ... 28 7.2
AL132865-20|CAB60594.2| 175|Caenorhabditis elegans Hypothetical... 28 7.2
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 28 7.2
Z82058-3|CAB04866.1| 349|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 314 EDIFHIHNKTDKITQLKDREKTR--LFLNTMANITNSNSDKKQEELINDIIASINRIKEN 487
EDIF +T +T D+ +F+ ++N+D+++ N++I S +E
Sbjct: 852 EDIFRRDRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERTSEHNELIESDKESEEA 911
Query: 488 ITKGNTGVINEAILLDKPIKVNQIKSGIEEKI 583
ITK V + I ++P+ + +S I KI
Sbjct: 912 ITKNEEDVDQDPIQSEEPLTSQEGESSIGNKI 943
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 314 EDIFHIHNKTDKITQLKDREKTR--LFLNTMANITNSNSDKKQEELINDIIASINRIKEN 487
EDIF +T +T D+ +F+ ++N+D+++ N++I S +E
Sbjct: 852 EDIFRRDRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERTSEHNELIESDKESEEA 911
Query: 488 ITKGNTGVINEAILLDKPIKVNQIKSGIEEKI 583
ITK V + I ++P+ + +S I KI
Sbjct: 912 ITKNEEDVDQDPIQSEEPLTSQEGESSIGNKI 943
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 314 EDIFHIHNKTDKITQLKDREKTR--LFLNTMANITNSNSDKKQEELINDIIASINRIKEN 487
EDIF +T +T D+ +F+ ++N+D+++ N++I S +E
Sbjct: 852 EDIFRRDRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERTSEHNELIESDKESEEA 911
Query: 488 ITKGNTGVINEAILLDKPIKVNQIKSGIEEKI 583
ITK V + I ++P+ + +S I KI
Sbjct: 912 ITKNEEDVDQDPIQSEEPLTSQEGESSIGNKI 943
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +2
Query: 338 KTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGV-I 514
K D+ + + K ++ L N D+K ++ + D A+ ++IKE + K +T +
Sbjct: 468 KDDQYAGMDEETKAKMILEKARN-EEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGG 526
Query: 515 NEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTT 658
+ LL KP QIK G+E + + N + ++E GKT T
Sbjct: 527 GDPNLLLKPY---QIK-GLEWMVSLYNNNLNGIL--ADEMGLGKTIQT 568
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +2
Query: 338 KTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGV-I 514
K D+ + + K ++ L N D+K ++ + D A+ ++IKE + K +T +
Sbjct: 468 KDDQYAGMDEETKAKMILEKARN-EEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGG 526
Query: 515 NEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTT 658
+ LL KP QIK G+E + + N + ++E GKT T
Sbjct: 527 GDPNLLLKPY---QIK-GLEWMVSLYNNNLNGIL--ADEMGLGKTIQT 568
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +2
Query: 338 KTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENITKGNTGV-I 514
K D+ + + K ++ L N D+K ++ + D A+ ++IKE + K +T +
Sbjct: 468 KDDQYAGMDEETKAKMILEKARN-EEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGG 526
Query: 515 NEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTT 658
+ LL KP QIK G+E + + N + ++E GKT T
Sbjct: 527 GDPNLLLKPY---QIK-GLEWMVSLYNNNLNGIL--ADEMGLGKTIQT 568
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical protein
F32E10.3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 314 EDIFHIHNKTDKITQLKDREKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKENIT 493
ED+ + + T++ KD E + + + +S + EE ++ AS + T
Sbjct: 653 EDVTTVASTTEEPKSDKDSEGSGSDIEE--STVSSAKPAEAEENEAELEASGHEEVSTTT 710
Query: 494 KGNTGVINEAIL--LDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTTERT 667
+ T + E + ++K K+ + +EK+ V+TK +T + +K TT T
Sbjct: 711 ESTTVAVKEVPVDEIEKIAKLEAKQHTEDEKVTVETKQETAVTPAPTTSEKTSTTAAPST 770
Query: 668 KYVE 679
K E
Sbjct: 771 KPAE 774
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +2
Query: 398 MANITNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEE 577
M N T+ SD+K+ + D++++ R + + E D+ + +K G+E
Sbjct: 475 MKNFTDQMSDEKKTLSLQDVVSASERYLQRMKCIRDMRGQED---DESARPKTMKEGLEI 531
Query: 578 KIDVQTKNQTNKIKSSNERDKGKTTTTERTK 670
+ +NQ N+ + +N+ K T +R K
Sbjct: 532 PVMAYNQNQGNQNRHNNKGFKTHTPDNDRPK 562
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 512 INEAILLDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTTE-RTKYVEI 682
INE IL+ I V++I EEK + + ++KS E G+ E +T+ V +
Sbjct: 394 INEKILISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGELKTREVNM 451
>AF024492-8|AAF98620.1| 336|Caenorhabditis elegans Serpentine
receptor, class h protein130 protein.
Length = 336
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -3
Query: 600 FFVCTSIFSSMPLLI*FTLIGLSSNIASFITPVFPLVIFSLILFIEAIMSLISSSCFLS 424
FF+C +I ++PLLI ++ + + +F F ++ ++ L I A LISS+ L+
Sbjct: 239 FFICLTIQITIPLLI--VIVPIVYIVFAFANSHFDQILNNISLNIMAFHGLISSAVMLT 295
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 640 FIPLITGFDFVSLIFCLYVYFLLNAAFNLIHFDRFV**YRFIYYSCIPFSYILFDSIYRS 461
F+P++ +FV L + FL+N FN+I F I+Y I FS + F I+ +
Sbjct: 146 FVPILNCLNFV-----LALIFLINLNFNVISFYMV---NSLIFYLAITFSLLFFKKIFYA 197
Query: 460 Y 458
+
Sbjct: 198 W 198
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 368 REKTRLFLNTMANITNSNSDKKQEELINDIIASINRIKE--NITKGNTGVINEAILLDKP 541
RE + + +N++ E +D++A+I+ KE + K + + A L KP
Sbjct: 168 REDPQFISEMIEQRGTTNTNAAIEFAQHDVMATISIEKEANQLAKISDLLQEPAELCPKP 227
Query: 542 IKVNQIKSGIEEKIDVQTKNQTNKIKSSNERDKGKTTTTERTKYVE 679
++ KS I K+ ++SNE+D TTTE T E
Sbjct: 228 PPMSPTKS-IHSNQSSPIKSDGYSSENSNEQDSSFETTTEETPLPE 272
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 469 K*NQREYN*REYRSNK*SDITRQTYQSESD*KRH*GENRRTNKKSD 606
K N R+Y+ R+Y S + S Y+ E+ K+ +N+R+ KKSD
Sbjct: 1488 KKNYRKYDERKYESEEYSFEETYDYEQENTNKKQ--KNQRSQKKSD 1531
>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical
protein F56A8.1 protein.
Length = 1049
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 519 SFITPVFPLVIFSLILFIEAIMSLISSS 436
+F+T ++P VIF L++FI + ISS+
Sbjct: 272 TFLTLLWPAVIFGLVVFIYGFIDSISSA 299
>Z81057-2|CAB02915.1| 127|Caenorhabditis elegans Hypothetical
protein F10D11.3 protein.
Length = 127
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +2
Query: 365 DREKTRLFLNTMANITNS-----NSDKKQEELINDIIASINRIKENITKGNTGVINEAIL 529
DRE RL + + ++ N D++Q +L+N + ++ + + TK + +
Sbjct: 10 DRESIRLLIGQIRDLYKEIVQMRNEDREQYKLMNGRVDALEKDRSLRTKKRRKINKDKTK 69
Query: 530 LDKPIKVNQIKSGIEEKIDVQTKNQTNKIKSSNE 631
LDK K +K+ + T N TN K ++E
Sbjct: 70 LDKE------KKSAAQKV-ISTSNMTNTPKITDE 96
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 28.7 bits (61), Expect = 5.5
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = +2
Query: 239 NKNINLENRHETENHALKCPFSRLIEDIFHIHNKTDKITQLKDREKTRLFLNTMANITNS 418
+K L+ R+E N +K +R+ + H++ D +LKD+ K T
Sbjct: 30 DKCSKLKKRNEDMNEEIKWRKTRISDYGEHLNMSLD---ELKDKFKAVTRKRDTIRFTE- 85
Query: 419 NSDKKQEELINDIIASINRIKENITKGNT-GVINEAILLDKPIKVNQIKSGIEEKIDVQT 595
+ KKQE+L D+ + K N GN E D K++++K+ +++ +++
Sbjct: 86 HLKKKQEKLYKDLESIKEDSKNNTIHGNVLRFRREYENEDSKRKLDEMKNTLDQ---LKS 142
Query: 596 KNQTNKIKSSN 628
+N+ KI S +
Sbjct: 143 ENKAWKILSED 153
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 90 IVFVIKDSSLSPGGGLVPTALYGCFLR 10
+V VI+D S G V TALY CF R
Sbjct: 554 VVLVIQDYSSGDGWTPVQTALYSCFSR 580
>Z92813-5|CAB07285.1| 425|Caenorhabditis elegans Hypothetical
protein T28A8.5 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 576 SSMPLLI*FTLIGLSSNIASFITPVFPL-VIFSLILFIEAI 457
SS P L+ FTLI + +P F V+FSLI+ I I
Sbjct: 241 SSRPALLHFTLILIFFGFICLFSPFFHFSVVFSLIIVISTI 281
>Z83216-7|CAB05676.2| 320|Caenorhabditis elegans Hypothetical
protein C08F11.9 protein.
Length = 320
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 283 VILCFMTVFQIYVFILDLP*KDPKDEYMFKS*NLHFRLARRRTW 152
+++CF+T+F YV++ K +F N HF R+T+
Sbjct: 31 IVICFLTIFPFYVYVNKKNQNSDKTALLFPMTN-HFYEMIRKTY 73
>AL132872-2|CAB60761.2| 119|Caenorhabditis elegans Hypothetical
protein Y116F11A.3 protein.
Length = 119
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 508 SCIPFSYILFDSIYRSYYVINXXXXXFV*IAIC 410
SC+ F F YR YY IN ++ + IC
Sbjct: 72 SCVAFLDYTFSFFYRIYYAINFPIRDYICVPIC 104
>AL132865-20|CAB60594.2| 175|Caenorhabditis elegans Hypothetical
protein Y62E10A.5a protein.
Length = 175
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 407 ITNSNSDKKQEELINDIIASINRIKENITKGNTGVINEAILLDKPIKVNQIKSGIEEKID 586
+ + + D + EEL +D ++N I T+ ++G++ LD IKVN + G +
Sbjct: 34 LLDDDLDDQMEEL-HDAYPTVNFIPGKPTQ-SSGIVQALNTLDSTIKVNAVHKG-DTAFG 90
Query: 587 VQTKNQTNKIKSSNER 634
+Q + KI R
Sbjct: 91 MQVYSAIQKIPKGETR 106
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +2
Query: 224 LGQVQNKNINLENRHETENHALKCPFSRLI---EDIFHIHNKTDKITQLKDREKTRLFLN 394
+G +Q N L+ + + P +++ ++ FH+H+K+D TQ++ L
Sbjct: 678 MGYIQTANKPLDMEMPMQQQPPQQPPQQMLPPNQNAFHLHSKSDDATQVQADPP----LE 733
Query: 395 TMANITNSNSDKKQEELINDIIASINRIKENITKGNTGVIN 517
N+TN KQE I + E K ++N
Sbjct: 734 INRNLTNWGMTYKQEMPARSIPSRRTWQNETFIKNELDLVN 774
>Z82058-3|CAB04866.1| 349|Caenorhabditis elegans Hypothetical
protein T27C5.5 protein.
Length = 349
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = -3
Query: 600 FFVCTSIFSSMPLLI*FTLIGLSSNIASFITPVFPLVIFSLILFIEAIMSLISSSCFL 427
FF+ +I ++PL I + LS I +FIT F + +L L A+ L SSS L
Sbjct: 239 FFIALTIQIAVPLFI--VIFPLSYLITAFITLHFDQMYNNLALNFIALHGLASSSVML 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,504,885
Number of Sequences: 27780
Number of extensions: 298221
Number of successful extensions: 1091
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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