Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L14
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 200 3e-52
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 136 3e-33
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 131 1e-31
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 89 7e-19
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 60 4e-10
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 56 8e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 53 4e-08
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 53 6e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 44 3e-05
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.11
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.20
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 31 0.20
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 27 2.4
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.2
SPCC306.02c |||Rab GTPase binding |Schizosaccharomyces pombe|chr... 27 3.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.2
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 3.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.2
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 4.2
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 5.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.4
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.4
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 7.4
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 25 9.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 200 bits (487), Expect = 3e-52
Identities = 94/107 (87%), Positives = 101/107 (94%)
Frame = +3
Query: 432 PSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 611
P P++NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEG
Sbjct: 109 PLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG 168
Query: 612 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXK 752
YALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIK K
Sbjct: 169 YALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEK 215
Score = 157 bits (380), Expect = 2e-39
Identities = 69/81 (85%), Positives = 72/81 (88%)
Frame = +2
Query: 218 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 397
P +MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97
Query: 398 PEEHPVLLTEAPLNPKGQQRE 460
PEEHP LLTEAPLNPK + +
Sbjct: 98 PEEHPCLLTEAPLNPKSNREK 118
Score = 70.1 bits (164), Expect = 3e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3
Query: 108 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 215
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 745 RXKLCYVALDFXQXMAT 795
+ KLCYVALDF Q + T
Sbjct: 213 KEKLCYVALDFEQELQT 229
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 136 bits (330), Expect = 3e-33
Identities = 74/209 (35%), Positives = 111/209 (53%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSGX*WSVWDRRTLM*EMRHRAKXXXXX 305
+ +DNGSG KAGFAGDD P+ +FP+ G+ S + + +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 306 XXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPSTPRANREKMTQIMFET 485
+ I S + P P N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 486 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 665
N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191
Query: 666 DYLMKILTERGYSFTTTAEREIVRDIKXK 752
DYL L + G+ ++AE+EIVR+IK K
Sbjct: 192 DYLQLQLRKSGHELVSSAEKEIVREIKEK 220
Score = 82.2 bits (194), Expect = 8e-17
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 233 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEH 409
VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 410 PVLLTEAPL 436
P+LLTE PL
Sbjct: 107 PLLLTEPPL 115
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 131 bits (316), Expect = 1e-31
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = +3
Query: 399 PRNTQSCSLRLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 578
PR + P P ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGD
Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGD 157
Query: 579 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXK 752
GV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++K K
Sbjct: 158 GVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEK 215
Score = 75.4 bits (177), Expect = 9e-15
Identities = 28/63 (44%), Positives = 48/63 (76%)
Frame = +2
Query: 254 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 434 LNP 442
+NP
Sbjct: 110 MNP 112
Score = 39.1 bits (87), Expect = 7e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 114 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 215
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 89.0 bits (211), Expect = 7e-19
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Frame = +3
Query: 432 PSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVS 587
P P NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+
Sbjct: 132 PLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVT 191
Query: 588 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 725
H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER
Sbjct: 192 HIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239
Score = 68.9 bits (161), Expect = 8e-13
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 434 LNPKGQQRED 463
LNP + RE+
Sbjct: 133 LNPP-ENREN 141
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPS 203
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 60.1 bits (139), Expect = 4e-10
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGX*WSVWDRRTLM*EMRHRA 287
EE+ +LV+D GS + G+AG+++P + PS G ++ +G V D L
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRNKYVVDE--LQIHAPIPG 65
Query: 288 KXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPS-TPRANREKM 464
T TW R G+ V+P + + PS P++ R+++
Sbjct: 66 MEVKNGKSNGIIQDWESTLYTWER-GLKEKLQ--VNP--TEYAMMITEPSWNPQSVRQQI 120
Query: 465 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 644
+ FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I +
Sbjct: 121 MEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQS 180
Query: 645 LAGRDLTDYLMKILTERGYSF 707
LAG L + ++ F
Sbjct: 181 LAGDFLNANIEQLFNTMNIEF 201
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 218 PAIRXVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 391
P+ V + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 392 VAPEEHPVLLTEAPLNPKGQQRE 460
V P E+ +++TE NP+ +++
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQ 119
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 55.6 bits (128), Expect = 8e-09
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 417 CSLRLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSH 590
C + P R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH
Sbjct: 119 CMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASH 178
Query: 591 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 707
+P+ G + R+ G + YL+K+ + SF
Sbjct: 179 VIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217
Score = 42.3 bits (95), Expect = 8e-05
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 245 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 421
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 422 TEAPLNP 442
TE NP
Sbjct: 121 TEPLANP 127
Score = 30.7 bits (66), Expect = 0.26
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVF 197
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 53.2 bits (122), Expect = 4e-08
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 450 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 629
+RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 630 ILRLDLAGRDLTDYLMKILTE 692
+L L GR +T +L +L E
Sbjct: 221 TQQLPLGGRYMTQHLQNLLRE 241
Score = 25.8 bits (54), Expect = 7.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 314 PIEHGIVTNWDDMEKIWHHTF 376
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +3
Query: 441 PRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 620
P NR K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 110 PPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
Query: 621 PHAILRLDLAGRDLTDYLMKILTERGY 701
+G + D L + L ++ +
Sbjct: 170 QKGYQVQHFSGNAINDILAQTLRDKNF 196
Score = 42.7 bits (96), Expect = 6e-05
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 299 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 442
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNP 110
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 215
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +3
Query: 558 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 737
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 738 DIK 746
+IK
Sbjct: 217 EIK 219
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/84 (20%), Positives = 42/84 (50%)
Frame = +3
Query: 456 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 635
EK+ I+F + + +++ + + +G + V+D G + + EG +P++ +
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319
Query: 636 RLDLAGRDLTDYLMKILTERGYSF 707
+++ G D+T MK+L + +
Sbjct: 320 KINYGGDDITLLFMKLLMRSHFPY 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 499 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 633
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +1
Query: 397 PRGTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV--VPPVSCWT 570
P G P P P P PP +PS +P VPPV
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP--P 1193
Query: 571 PATVSPTPCPSTRDTHSPTPS 633
P+ P P PS P PS
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPS 1214
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 633
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 633
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.20
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 472 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 633
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 29.9 bits (64), Expect = 0.45
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 472 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 633
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +1
Query: 406 TPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS 585
T P S P PT P S S ST PP S S + + + SC T ++
Sbjct: 343 TSIPPTGNSTTPVTPTVP--PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIP 400
Query: 586 PTPCPSTRDTHSPTPS 633
PT +T T + P+
Sbjct: 401 PTGNSTTPVTPTVPPT 416
Score = 27.9 bits (59), Expect = 1.8
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Frame = +1
Query: 397 PRGTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTP 573
P T S SP P T SC+ ++ P T S S P VPP S T
Sbjct: 209 PTSTSSTDTNSSPLPTTST------SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTS 260
Query: 574 ATVSPTPCPSTRDTHSPTPS 633
+ PT ST SP P+
Sbjct: 261 IPIPPTSTSSTDTNSSPLPT 280
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 472 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTP 630
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +1
Query: 406 TPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS 585
T P S P PT P S S ST PP S S + + SC T ++
Sbjct: 289 TSIPPTGNSTTPVTPTVP--PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIP 346
Query: 586 PTPCPSTRDTHSPTPS 633
PT +T T + P+
Sbjct: 347 PTGNSTTPVTPTVPPT 362
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 31.1 bits (67), Expect = 0.20
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 397 PRGTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTP 573
P + SPA+ S PT + +S P SP+ P T P P S ++P
Sbjct: 1563 PGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP 1622
Query: 574 ATVSPTPCPSTRDTHSPT 627
+ S +P T ++SPT
Sbjct: 1623 TSPSYSP---TSPSYSPT 1637
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 SPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSP 588
SP++ + PT + +S P SP+ P T P P S ++P + S
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1662
Query: 589 TPCPSTRDTHSPT 627
+P T ++SPT
Sbjct: 1663 SP---TSPSYSPT 1672
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 SPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSP 588
SP++ + PT + +S P SP+ P T P P S ++P + S
Sbjct: 1589 SPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1648
Query: 589 TPCPSTRDTHSPT 627
+P T ++SPT
Sbjct: 1649 SP---TSPSYSPT 1658
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 SPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSP 588
SP++ + PT + +S P SP+ P T P P S ++P + S
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1683
Query: 589 TPCPSTRDTHSPT 627
+P T ++SPT
Sbjct: 1684 SP---TSPSYSPT 1693
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 SPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSP 588
SP++ + PT + +S P SP+ P T P P S ++P + S
Sbjct: 1645 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1704
Query: 589 TPCPSTRDTHSPT 627
+P T ++SPT
Sbjct: 1705 SP---TSPSYSPT 1714
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 412 SPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSP 588
SP++ + PT + +S P SP+ P T P P S ++P + S
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1725
Query: 589 TPCPSTRDTHSPT 627
+P T ++SPT
Sbjct: 1726 SP---TSPSYSPT 1735
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 520 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 624
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 415 PAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRC 534
P G+P P P P+SC + C S+PC C
Sbjct: 632 PVACGTPIPDCPYLCVLPKSCHHPQVKHNCHPTSEPCPPC 671
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 656 RPHRLPHEDPHRARLLVHYHRRAGNRS*HQGKSCATSLLTSXRXW 790
RP + P DPH + L Y R + R +SCA +L R +
Sbjct: 263 RPQKPPQIDPHSSSLADEY-RESNKRLQESKESCARFILDCDRKY 306
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 520 PCSRCTRPVVPPVSCWTPATVSPTPCPST 606
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC306.02c |||Rab GTPase binding |Schizosaccharomyces pombe|chr
3|||Manual
Length = 171
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 423 LRLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 584
+R S PR E ++I F + Y+AI A+L +YA R +++ G GV
Sbjct: 38 VRRISRPRNFSEAQSRISFNFSRFSSNYLAIIAMLVIYALIRNPLLLIVIGIGV 91
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 466 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 624
P S S+ + PP P+ P + P +PP+ + + P P P + +P
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGR--SAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -1
Query: 541 DAYSESTAWMATYMAGVLNVSNMIWVIFSLLALGVEGSLSEQDWVF 404
D + W+ A + +++ IF L G EG++ + WVF
Sbjct: 2066 DTVAPGRVWITNVAAWIYAIASASGSIFFSLNFGEEGAVQTRIWVF 2111
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 496 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 603
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +1
Query: 403 GTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATV 582
G +PAH S P P P+ + PP + P P + PP+ P +
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-------PPMPA-GPPSA 1730
Query: 583 SPTPCPSTRDTHSPTP 630
P P P++ P P
Sbjct: 1731 PPPPLPASSAPSVPNP 1746
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 4.2
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 361 LASYLLQ*AACRPRGTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTR 540
+AS LL A + +G PSPA S P++ S T+ T S P S T
Sbjct: 498 VASPLLHLLASKSQGLPSPATTDSNTHMLPSQGSLLPPSSISETKSFSTKASTPLS--TD 555
Query: 541 PVVPPV-SCWTPATVSPTPCPSTRDTHSPTPS 633
+ P+ S P +V PT T +HS S
Sbjct: 556 DIATPLSSAPNPPSVMPTYARKT-SSHSERSS 586
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 554 RYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 733
RYR L R P LR + +PP PA+ SR P RL++ H++ R
Sbjct: 84 RYRGSLLNRNSPS---LRSL-SPPATPATPRSRIEGESQTSAIPQTDRLILENHQQEFER 139
Query: 734 S*HQGKSCATSL 769
+ + +S +L
Sbjct: 140 AARRFRSSIAAL 151
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 397 PRGTPSPAH*GSPQPQGPTERR*PRSCSKHSTRPPCTSPSK--PCSRCTRPVVPPVSCWT 570
P P+P +P P P + ++ S +TRP T+P K + +PV P +
Sbjct: 893 PAPIPAPVAEPAP-PAAPAKEVVEKAPSPPATRPKSTTPQKFDDDAWANKPVTEPPVRAS 951
Query: 571 PATVSP 588
TV P
Sbjct: 952 SVTVEP 957
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 153 TYRSHCLLPTRQLLRRTS*ISEI 85
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 502 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 645
C +PS+ C + PV + T S TP P+T + +PTP+ T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 490 LNVSNMIWVIFSLLALGVEGSLSEQDWVF 404
L +S + W + + V GSL EQ+W F
Sbjct: 83 LFISWIRWDAIYFVDMAVNGSLFEQEWAF 111
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 9.8
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +1
Query: 514 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTRDT-HSPTPSCVWT*PV 654
S+ S T P PP + T PA SP P P +T H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPP-PKVGETYHPPTASGTRVPPV 948
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,421,211
Number of Sequences: 5004
Number of extensions: 78424
Number of successful extensions: 334
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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