Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L11
(862 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 244 1e-65
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 135 9e-33
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 130 2e-31
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 126 4e-30
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 33 0.039
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 30 0.49
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 29 0.85
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 27 2.6
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 3.4
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 27 4.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.5
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 4.5
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 26 6.0
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 6.0
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 26 6.0
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 6.0
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 26 6.0
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 6.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 7.9
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 244 bits (597), Expect = 1e-65
Identities = 107/162 (66%), Positives = 127/162 (78%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREIVH+QAGQCGNQ+GA FW I+DEHG+D G YHG S+ Q ER+NVY+NEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+LVDLEPGTMD+V+SG FG +FRPDN ++GQSGAGN WAKGHYTEGAEL D+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
R+ +E+CD LQGFQ KIREEYP++
Sbjct: 121 RREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDR 162
Score = 120 bits (288), Expect = 4e-28
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV P+PK SDTVVEPYNATLS+HQLVEN+DET+CIDNEAL I TLK+ +
Sbjct: 160 PDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKS 219
Query: 742 PTYGDLNHLVSLTMFGVXT 798
P+Y DLNHLVS M GV T
Sbjct: 220 PSYDDLNHLVSAVMAGVTT 238
Score = 33.9 bits (74), Expect = 0.030
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPG+LN+DL KLA N VP
Sbjct: 241 RFPGELNSDLRKLAVNMVP 259
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 135 bits (326), Expect = 9e-33
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER--INVYYNEASGGK 257
MREI+ + GQ G QIG WE+ EHGI P G + ++ Q + +++E GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
YVPR+I VDLEP +D VR+GP+ +F P+ + G+ A NN+A+GHYT G ELVD V D
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTD 120
Query: 438 VVRKGSESCDCLQGF 482
+R+ +++C LQGF
Sbjct: 121 KIRRIADNCSGLQGF 135
Score = 73.3 bits (172), Expect = 4e-14
Identities = 30/64 (46%), Positives = 46/64 (71%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
+SV P+P+VS +VVEPYN+ L+ H ++ D T+ +DNE+ YDIC R L + P+Y +LN
Sbjct: 169 FSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNLDIERPSYENLN 228
Query: 763 HLVS 774
L++
Sbjct: 229 RLIA 232
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 130 bits (314), Expect = 2e-31
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTG------AYHGDSDLQLERINVYYNEA 245
MRE++ + GQ G QIG WE+ EHGI P G H ++ + +++E
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60
Query: 246 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 425
GK+VPR+I VDLEP +D VR+GP+ +F P+ V G+ A NN+A+GHYT G E++D
Sbjct: 61 GQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMID 120
Query: 426 SVLDVVRKGSESCDCLQGF 482
SVL+ +R+ +++C LQGF
Sbjct: 121 SVLERIRRMADNCSGLQGF 139
Score = 80.2 bits (189), Expect = 3e-16
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
+SV P+P+VS +VVEPYN+ L+ H ++N+D T+ +DNEA YDIC R L + PTY +LN
Sbjct: 173 FSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLN 232
Query: 763 HLVS 774
L++
Sbjct: 233 RLIA 236
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 126 bits (304), Expect = 4e-30
Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 2/177 (1%)
Frame = +3
Query: 87 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 266
REI+ LQAGQCGNQIG++FW+ + EHGI P G + ++R +V++ ++ +Y+P
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIP 62
Query: 267 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDV 440
RAIL+DLEP ++++ S +G ++ P+N + ++ GAGNNWA G Y+ + + ++D+
Sbjct: 63 RAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDM 121
Query: 441 VRKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQNHEHILSSPLAQSI 611
+ + ++ D L+GF ++ + YP++ + P +QS+
Sbjct: 122 IDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSV 178
Score = 62.5 bits (145), Expect = 7e-11
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 562 PNRIMNTYSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLS 738
P +I+ TYSV P S VSD VV+PYN+ L++ +L N D +DN AL I L
Sbjct: 162 PKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQ 221
Query: 739 TPTYGDLNHLVSLTM 783
PT+ N LVS M
Sbjct: 222 NPTFHQQNQLVSTVM 236
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 33.5 bits (73), Expect = 0.039
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +1
Query: 388 PRDTTQRVLSSLTRSSM*SAKDQNLAIAYRASNLHIPSVAAPGPVWAPSS----SQRSVK 555
PR++T++ L S++ S S+ Q + +S L+ PS AP P + SS S ++VK
Sbjct: 219 PRESTEKPLLSVSALSS-SSHLQPTSATSSSSRLY-PSRPAPTPPASSSSSPLLSSQTVK 276
Query: 556 STPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 681
+T + S + S K +D ++ ++ L Q + +T ET
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIRSHSPVLLTPQTL-STSET 317
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 668 TQTKHTASTTRLYTTSASALSNCPHPLTVTLTT*FPSQCLVSPLAXRFPGQLNADL 835
T T +T + TTS S ++CP P T+ + T P+ + + +PG + L
Sbjct: 166 TSTSCNPATVLIVTTSGSTSTSCPPPTTILIVT-VPTTTTTTTVG--YPGSVTTTL 218
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 547 SVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 669
SVKS N +++ +P+ + +P N + VHQL EN
Sbjct: 146 SVKSDKNTYLSSPGFYGTPQPLNQFTDPNNTAVYVHQLPEN 186
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 467 LPTGLPTYTFPRWRHRVRYGHPPHLKDP*RVPRTES 574
LP PT +R +V G P L DP RV RTE+
Sbjct: 974 LPEFTPTTNLQLFRDKVIRGLIPCLDDPKRVVRTEA 1009
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 123 NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERI 224
N++G E+++++ +DPT A + DLQ++ +
Sbjct: 133 NELGENEEEVLTEQKQLDPTLAAKKELDLQMDAV 166
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 481 SNLH---IPSVAAPGPVWAPSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATL 645
SNLH I S + G A S+ Q PN I+NTY S +++E Y+ L
Sbjct: 81 SNLHRQIIHSTSKQGMHKAISAKQFLEDLNPNVIINTYLEFASASNLFSIIEQYDVVL 138
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 493 IPSVAAPGPVWAPSSSQRSVKSTPNRIMNTYSVVP-SPKVSDTVVEP 630
+PS++AP P P S +V S PN + V +P ++ T P
Sbjct: 245 VPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP 291
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 318 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 419
GP+G +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 532 SSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNAT 642
S+ VK NRI N S++ +P+VS + + T
Sbjct: 743 SNHDNEVKKENNRIRNASSLMENPRVSTKTFDNFTLT 779
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 530 PPHLKDP*RVPRTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKH-TASTTRLY 706
P H +P P T S T + P T SS+H LS + +T H S T +
Sbjct: 128 PSHSYEPTTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESK--QTSDGHRPPSPTSIT 185
Query: 707 TTSAS 721
TTS S
Sbjct: 186 TTSTS 190
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 387 AKGHYTEGAELVDSVLDVVRKGSESCDCLQ 476
A+GH G ELV + D +RK SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 26.2 bits (55), Expect = 6.0
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 532 SSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYN-ATLSVHQLVENTDETYCIDNEALY 708
SSS SV S P M S+ SP+ SD N ++ +VH + + + T
Sbjct: 681 SSSPYSVFSHPPPYMGRQSLNDSPQTSDFKASNLNDSSSNVHSIFQTRETTSPSVQNKTP 740
Query: 709 DICFRTLKLSTPTYGDLNHLVSLTMFGVXT 798
R LK S + + LVS + G T
Sbjct: 741 TKYHRELKSSKDGHEQASPLVSSSPSGSFT 770
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 460 LAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 555
LA+ Y + + +V APG +W+P+ +R K
Sbjct: 159 LAVRYGPLGIRV-NVCAPGTIWSPAWDERFKK 189
>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 67 KITYTK*GKSFIYRPANVV 123
+I+YT G SFIYRP N++
Sbjct: 64 EISYT--GTSFIYRPGNII 80
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 481 SNLHIPSVAAPGPVWAPSSSQRSVKSTPNRIMNTYSVVPSPKVS 612
S +H S A PGP+ PS+ ST + Y +P S
Sbjct: 241 SPMHTYSSAVPGPISVPSAPYGRASSTIAEVSPMYGSHAAPYAS 284
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +1
Query: 406 RVLSSLTRSSM*SAKDQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPNRIMNTY 585
RV ++ S S K ++A +S++ +PS ++ P + S S S+P ++T
Sbjct: 443 RVQTTTVSSISTSVKQPTASVA--SSSVSVPSSSSVQPQSSTPISSSSSASSPQSTLSTS 500
Query: 586 SVVPSPKVSDTVVEPYNA 639
S V S +VS T++ +A
Sbjct: 501 SEVVS-EVSSTLLSGSSA 517
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 526 APSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNAT 642
A S++ SV ST NT SV+P+ VS T + N+T
Sbjct: 394 ANSTTSTSVSSTAPSY-NTSSVLPTSSVSSTPLSSANST 431
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 526 APSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNAT 642
A S++ SV ST NT SV+P+ VS T + N+T
Sbjct: 508 ANSTTSTSVSSTAPSY-NTSSVLPTSSVSSTPLSSANST 545
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,298,868
Number of Sequences: 5004
Number of extensions: 67419
Number of successful extensions: 257
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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