Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L11
(862 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 274 4e-74
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 271 3e-73
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 271 3e-73
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 270 1e-72
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 269 1e-72
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 269 1e-72
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 268 3e-72
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 267 6e-72
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 267 7e-72
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 135 4e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 135 4e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 2e-31
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 132 4e-31
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 132 4e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 129 2e-30
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 129 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 109 2e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 109 2e-24
At4g37190.1 68417.m05265 expressed protein 33 0.24
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.43
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 30 1.7
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 30 1.7
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 5.3
At2g27770.1 68415.m03365 expressed protein 29 5.3
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2) 28 7.0
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 28 7.0
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 9.2
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 28 9.2
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 274 bits (673), Expect = 4e-74
Identities = 122/163 (74%), Positives = 139/163 (85%), Gaps = 1/163 (0%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 260
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 261 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 440
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 441 VRKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
VRK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 163
Score = 136 bits (330), Expect = 1e-32
Identities = 64/80 (80%), Positives = 71/80 (88%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLST
Sbjct: 161 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLST 220
Query: 742 PTYGDLNHLVSLTMFGVXTC 801
P++GDLNHL+S TM GV TC
Sbjct: 221 PSFGDLNHLISATMSGV-TC 239
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 242 RFPGQLNSDLRKLAVNLIP 260
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 271 bits (665), Expect = 3e-73
Identities = 120/162 (74%), Positives = 137/162 (84%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+T
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTT 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
P++GDLNHL+S TM GV C P
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 271 bits (665), Expect = 3e-73
Identities = 122/163 (74%), Positives = 137/163 (84%), Gaps = 1/163 (0%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 260
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 261 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 440
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 441 VRKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
VRK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 163
Score = 136 bits (330), Expect = 1e-32
Identities = 64/80 (80%), Positives = 71/80 (88%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLST
Sbjct: 161 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLST 220
Query: 742 PTYGDLNHLVSLTMFGVXTC 801
P++GDLNHL+S TM GV TC
Sbjct: 221 PSFGDLNHLISATMSGV-TC 239
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 242 RFPGQLNSDLRKLAVNLIP 260
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 270 bits (661), Expect = 1e-72
Identities = 122/162 (75%), Positives = 135/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLAN 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
PT+GDLNHL+S TM GV C P
Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 269 bits (660), Expect = 1e-72
Identities = 120/162 (74%), Positives = 135/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+T
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTT 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
P++GDLNHL+S TM GV C P
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 269 bits (660), Expect = 1e-72
Identities = 120/162 (74%), Positives = 135/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+T
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTT 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
P++GDLNHL+S TM GV C P
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 268 bits (657), Expect = 3e-72
Identities = 122/162 (75%), Positives = 135/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+ DCLQGFQ KIREEYP++
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLAN 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
PT+GDLNHL+S TM GV C P
Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 267 bits (655), Expect = 6e-72
Identities = 119/162 (73%), Positives = 136/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 139 bits (336), Expect = 3e-33
Identities = 64/84 (76%), Positives = 71/84 (84%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLST
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLST 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
P++GDLNHL+S TM GV C P
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 267 bits (654), Expect = 7e-72
Identities = 118/162 (72%), Positives = 135/162 (83%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 263
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 264 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 443
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 444 RKGSESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPEQ 569
RK +E+CDCLQGFQ KIREEYP++
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Score = 137 bits (332), Expect = 8e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 562 PNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
P+R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+T
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTT 219
Query: 742 PTYGDLNHLVSLTMFGVXTCX*VP 813
P++GDLNHL+S TM GV C P
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFP 243
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 806 RFPGQLNADLXKLAXNXVP 862
RFPGQLN+DL KLA N +P
Sbjct: 241 RFPGQLNSDLRKLAVNLIP 259
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
VRK +++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
Query: 763 HLVSLTMFGVXT 798
L+S + + T
Sbjct: 229 RLISQIISSLTT 240
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
VRK +++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
Query: 763 HLVSLTMFGVXT 798
L+S + + T
Sbjct: 229 RLISQIISSLTT 240
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 2e-31
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 438 VVRKGSESCDCLQGF 482
+RK +++C LQGF
Sbjct: 121 RLRKLADNCTGLQGF 135
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/72 (51%), Positives = 52/72 (72%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLN 228
Query: 763 HLVSLTMFGVXT 798
L+S T+ + T
Sbjct: 229 RLISQTISSLTT 240
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLN 228
Query: 763 HLVS 774
LVS
Sbjct: 229 RLVS 232
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 132 bits (318), Expect = 4e-31
Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLN 228
Query: 763 HLVS 774
LVS
Sbjct: 229 RLVS 232
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLN 228
Query: 763 HLVS 774
LVS
Sbjct: 229 RLVS 232
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 257
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 437
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 438 VVRKGSESCDCLQGF 482
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 583 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 762
++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLN 228
Query: 763 HLVS 774
LVS
Sbjct: 229 RLVS 232
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (263), Expect = 2e-24
Identities = 49/134 (36%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 87 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 266
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 267 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 440
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 441 VRKGSESCDCLQGF 482
+ + ++ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 568 RIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTP 744
+++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I L L+ P
Sbjct: 164 KLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNP 223
Query: 745 TYGDLNHLVSLTM 783
T+ N LVS M
Sbjct: 224 TFAQTNSLVSTVM 236
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (262), Expect = 2e-24
Identities = 49/134 (36%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 87 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 266
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 267 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 440
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 441 VRKGSESCDCLQGF 482
+ + ++ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 568 RIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTP 744
+++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I L L+ P
Sbjct: 164 KLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNP 223
Query: 745 TYGDLNHLVSLTM 783
T+ N LVS M
Sbjct: 224 TFAQTNSLVSTVM 236
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 84 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 251
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 252 GKYVPRAILVDLEP--GTMDS 308
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 610 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 741
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +1
Query: 538 SQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 717
S S N+ +P + T++E +N + LVE + ++N DIC
Sbjct: 787 SMGKADSDENKCQGVKPFMPMLSPTLTLLELWN----IPNLVELSSSFQNLNNLERLDIC 842
Query: 718 FRTLKLSTPTYGDLNHLVSLTMFG 789
+ S PT +L LVSL +FG
Sbjct: 843 YCRNLESLPTGINLESLVSLNLFG 866
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +1
Query: 538 SQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 717
S S N+ +P + T++E +N + LVE + ++N DIC
Sbjct: 748 SMGKADSDENKCQGVKPFMPMLSPTLTLLELWN----IPNLVELSSSFQNLNNLERLDIC 803
Query: 718 FRTLKLSTPTYGDLNHLVSLTMFG 789
+ S PT +L LVSL +FG
Sbjct: 804 YCRNLESLPTGINLESLVSLNLFG 827
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 83 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 169
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At2g27770.1 68415.m03365 expressed protein
Length = 320
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 499 SVAAPGPVWAPSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 672
S+ P+ SSS K + N + + S++PS + S T + Y TLS H +++ T
Sbjct: 12 SINVTHPLSISSSSSSCSKYSTNNVCISPSLIPSIQTSITSI--YRITLSKHLIIKVT 67
>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
Length = 638
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 511 PGPVWAPSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 660
P P PS S + + + + ++PSP + T + Y +S+HQL
Sbjct: 147 PPPQQPPSPSSTTSPRSHHNSSTLHMLLPSPSTNTTHHQNYTNHMSMHQL 196
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +1
Query: 532 SSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSV----HQLVENTDE 678
S S++ + R+ N YS +P+ + + + Y+AT++V +Q+V+ T++
Sbjct: 103 SESKKLTRVMARRVHNVYSSLPAYSLDELLGPKYSATVTVGGRTNQVVQTTEQ 155
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 431 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 315
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 517 PVWAPSSSQRSVKSTPNRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 696
P++ SSS+ ++ ++T+ VP ++ P L+ H L + + Y N
Sbjct: 542 PIYLHSSSEPLERNGGGEGLDTFETVPEAAPAELKEPPIEDQLAFHTLWPESHKLYGHGN 601
Query: 697 EALYDIC 717
E L+ +C
Sbjct: 602 E-LFSLC 607
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,975,114
Number of Sequences: 28952
Number of extensions: 392732
Number of successful extensions: 1206
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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