Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_L07
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 299 2e-81
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 297 6e-81
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 294 7e-80
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 290 1e-78
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 274 8e-74
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 248 5e-66
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 163 1e-40
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 137 9e-33
05_01_0213 - 1606383-1606816,1607695-1608355 31 1.2
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420... 31 1.2
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 31 1.6
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 31 1.6
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 29 3.7
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644... 29 3.7
08_02_0839 + 21693348-21694853 29 6.5
06_03_0384 + 20174441-20175788,20176215-20176858 29 6.5
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 29 6.5
09_04_0292 - 16436918-16439233 28 8.6
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 28 8.6
07_03_0840 + 21935504-21936424,21936516-21938177 28 8.6
07_03_0839 + 21916842-21917852,21917944-21919602 28 8.6
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 28 8.6
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 299 bits (733), Expect = 2e-81
Identities = 145/199 (72%), Positives = 165/199 (82%)
Frame = +2
Query: 98 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 277
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285
Query: 278 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 457
RIISSIEQKEE++G ED+ +I+ YR ++E EL IC IL +LD +L+PSS ESKVF
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345
Query: 458 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLALNFSXF 637
Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL PTHPIRLGLALNFS F
Sbjct: 346 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 405
Query: 638 YYEIXNSPDRXCRLAKAAF 694
YYEI NSPDR C LAK AF
Sbjct: 406 YYEILNSPDRACNLAKQAF 424
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 297 bits (730), Expect = 6e-81
Identities = 144/199 (72%), Positives = 166/199 (83%)
Frame = +2
Query: 98 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 277
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 9 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67
Query: 278 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 457
RIISSIEQKEE++G ED++ +I+ YR ++E EL IC IL +L+ +L+PSS ESKVF
Sbjct: 68 RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127
Query: 458 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLALNFSXF 637
Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL PTHPIRLGLALNFS F
Sbjct: 128 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 187
Query: 638 YYEIXNSPDRXCRLAKAAF 694
YYEI NSPDR C LAK AF
Sbjct: 188 YYEILNSPDRACNLAKQAF 206
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 294 bits (721), Expect = 7e-80
Identities = 142/199 (71%), Positives = 164/199 (82%)
Frame = +2
Query: 98 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 277
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 3 REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 278 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 457
RI+SSIEQKEE +G E+ + +I+ YR ++E EL IC IL +LD +L+PSS ESKVF
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 458 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLALNFSXF 637
Y KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA DIA+ +L PTHPIRLGLALNFS F
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVF 181
Query: 638 YYEIXNSPDRXCRLAKAAF 694
YYEI NSPD+ C LAK AF
Sbjct: 182 YYEILNSPDKACNLAKQAF 200
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 290 bits (711), Expect = 1e-78
Identities = 143/206 (69%), Positives = 165/206 (80%)
Frame = +2
Query: 77 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 256
+S + RE+NVY AKLAEQAERY+EMVE M+ VA + ELTVEERNLLSVAYKNVI
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59
Query: 257 GARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 436
GARRASWRIISSIEQKEE++G E + I+ YRS++E EL IC IL +LD +L+PS+
Sbjct: 60 GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119
Query: 437 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGL 616
ESKVFY KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A DIA+ +L THPIRLGL
Sbjct: 120 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGL 179
Query: 617 ALNFSXFYYEIXNSPDRXCRLAKAAF 694
ALNFS FYYEI NSPDR C LAK AF
Sbjct: 180 ALNFSVFYYEILNSPDRACNLAKQAF 205
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 274 bits (671), Expect = 8e-74
Identities = 136/201 (67%), Positives = 160/201 (79%), Gaps = 2/201 (0%)
Frame = +2
Query: 98 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN--ELTVEERNLLSVAYKNVIGARRA 271
RE+ VY AKLAEQAERY+EMVE M+ V + + ELTVEERNLLSVAYKNVIGARRA
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 272 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESK 451
SWRI+SSIEQKEE +GA R+YR++VE EL +IC+ IL +LD+ L+P++ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 452 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLALNFS 631
VFY KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA DIAM EL PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
Query: 632 XFYYEIXNSPDRXCRLAKAAF 694
FYYEI NSPDR C LAK AF
Sbjct: 190 VFYYEILNSPDRACTLAKQAF 210
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 248 bits (607), Expect = 5e-66
Identities = 120/181 (66%), Positives = 140/181 (77%)
Frame = +2
Query: 152 EMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDK 331
E +E + A ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE +G +
Sbjct: 3 EYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAH 62
Query: 332 LNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATG 511
IR+YR ++E EL IC IL +LD +L+PS+ ESKVFY KMKGDYHRYLAEF +G
Sbjct: 63 AATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSG 122
Query: 512 NDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLALNFSXFYYEIXNSPDRXCRLAKAA 691
++RK+AAE+++ AYKAA DIA+ +L PTHPIRLGLALNFS FYYEI NSPDR C LAK A
Sbjct: 123 DERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQA 182
Query: 692 F 694
F
Sbjct: 183 F 183
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 163 bits (397), Expect = 1e-40
Identities = 82/157 (52%), Positives = 114/157 (72%)
Frame = +2
Query: 89 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 268
M ERE V AKLAEQAERYD+MVE MK +A +V +++ EER L SV +K IGARR
Sbjct: 1 MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57
Query: 269 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 448
ASWRI+ S+EQK T G + + I Y+ +VE ELR +C+++L ++ + +P + +GE+
Sbjct: 58 ASWRILESLEQKV-TAGDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGEN 115
Query: 449 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKA 559
VF+YKMKGDY+RYLAEF+TG ++K A + SL+AY+A
Sbjct: 116 VVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA 152
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 137 bits (332), Expect = 9e-33
Identities = 85/193 (44%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
Frame = +2
Query: 155 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 334
MVEAM +VA D LT EERNLLSV YKN+IGA+RA+ RII SIE KEETKG E +
Sbjct: 1 MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57
Query: 335 NMIRAYRSQVEKELRDICSDILGVLDKY-----LIPSSQTGESKVFYYKMKGDYHRYLAE 499
YR +VE E+ IC D++ ++DK + +TG K+ ++ + +
Sbjct: 58 RQTAEYRRKVEAEMDKICCDVINIIDKKGDYYRYLAEFKTGTEKIEVSELSLNAYEACDP 117
Query: 500 FATGNDRKEAAENSLVAYK--------AASDIAMTELXPTHPIRLGLALNFSXFYYEIXN 655
F N + + + AS A T+L PT PIRLGLALN S FY EI N
Sbjct: 118 FFIFNLFLFSQVTCFIEFTIYQVLVVYTASKTAQTDLTPTDPIRLGLALNISVFYCEIMN 177
Query: 656 SPDRXCRLAKAAF 694
SPD+ C+LAK AF
Sbjct: 178 SPDKACQLAKNAF 190
>05_01_0213 - 1606383-1606816,1607695-1608355
Length = 364
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +1
Query: 157 GGGDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIE 336
GGGD++ ++ +V+ + G V RL D PP R +RR R +
Sbjct: 25 GGGDDDGAVVVQVQVQQEEGMSPCVVARLMGLDAMPPPPPETECQPLRRQRRRRRSRSVS 84
Query: 337 HDQSVPQP 360
+ P P
Sbjct: 85 SAEGWPPP 92
>03_05_0469 +
24640925-24641081,24641292-24641644,24641870-24642043,
24642382-24642506,24643011-24643059,24643741-24643899,
24644037-24644219
Length = 399
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 185 RNVSDN-ELTVEERNLLSVAYKNVIGA-RRASWRIISSIE-QKEETKGAEDKLNMIRAYR 355
R +SD E +E+ N + AY+ + + ++ I+S + QKE K E++ ++A
Sbjct: 181 RLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKVIEEEEKKLKAAI 240
Query: 356 SQVEKELRDICSDI 397
+ EK+ +ICS++
Sbjct: 241 EEAEKQYSEICSEM 254
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 30.7 bits (66), Expect = 1.6
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Frame = +2
Query: 77 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVA--SRNVSDN------ELTVEERN-L 229
L TM E+ + L Q ++ + E +K V + ++SD+ L+ +N L
Sbjct: 239 LCKTMEEQSQLASEENL--QVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNAL 296
Query: 230 LSVAYKNVIGARRASW-RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGV 406
LS AY N+ W + ISS+ Q+ G Y+ + K L L +
Sbjct: 297 LSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGS----EIYQESLVKALTKHFGAKLLI 352
Query: 407 LDKYLIPSSQTGESKVFYYKMKGDYHRYL 493
+D L+ S Q+ +SK KGD RY+
Sbjct: 353 IDPSLLASGQSSKSKESESYKKGDRVRYI 381
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSVAYK 247
+R N + KLAE + E ++ +A +NVS E+T+ E N + V+ K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 89 MSEREDNVYKAKL------AEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 250
+ E ED V K K+ AE + + VEA+K + VE N + A +N
Sbjct: 678 VKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQLCAANTEVERLNSIVQALEN 737
Query: 251 VIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLD 412
I +A + + + E K E+K ++ + +E +L +++L + D
Sbjct: 738 DIEKEKA---LHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKLRD 788
>07_03_0941 -
22763733-22763970,22764077-22764213,22764282-22764470,
22765238-22765756,22766319-22767357,22767665-22767759,
22768253-22768357
Length = 773
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 347 AYRSQVEKELRDICSDILGVLD 412
AY+SQ EK +R ICS++L + D
Sbjct: 28 AYQSQTEKGIRKICSELLELKD 49
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 74 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 172
HLS M + E+ + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 452 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELXPTHPIRLGLA 619
++ Y KGD HR+L E G E + A ++++ H I LG+A
Sbjct: 456 LYEYMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 619 AQLLRVLLRDXEQPGPXLPARQGRLXTTPSPEL 717
A+L+ L++ +P P LPAR G L T P E+
Sbjct: 244 ARLVGRLVKGSSKPHPSLPARGGLLRTAPVHEV 276
>09_04_0292 - 16436918-16439233
Length = 771
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 275 WRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKV 454
W I +SI E+K + + Y +V L CS ++ LIP T S++
Sbjct: 548 WHIATSICCYGESKFDMAQADAELRYHYEVATVLSGYCSYLVAFAPD-LIPDG-TYTSQL 605
Query: 455 FYYKMKGDYHRYLAEFATGNDR 520
++ D H YLAE T +D+
Sbjct: 606 LSCRVLKDAHAYLAECRTTSDK 627
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 244 QERDRRPPRLLADHLLHRTEGRNKRRRRQIEHDQSVPQ 357
Q+RD PPR L+ H ++ + RRR HD PQ
Sbjct: 205 QQRDPSPPRRLSRHDSKESQDISPPRRR-TRHDSEEPQ 241
>07_03_0840 + 21935504-21936424,21936516-21938177
Length = 860
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 417 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 244
Y+SR P + Q + + LR + + LS+APFV +F + +A RAP+ F+
Sbjct: 343 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 399
>07_03_0839 + 21916842-21917852,21917944-21919602
Length = 889
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 417 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 244
Y+SR P + Q + + LR + + LS+APFV +F + +A RAP+ F+
Sbjct: 373 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 429
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 394 HPRCPRQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCRELAGRV 552
H PR L + ++ L+NEGR +P + + GC + G V
Sbjct: 401 HALVPRTGDGAPLALQPLEKLRLENEGRNKVIPNLLASSMEKEDGCSRVGGAV 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,358,574
Number of Sequences: 37544
Number of extensions: 392203
Number of successful extensions: 1337
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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