Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K24
(1602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.091
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.64
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 35.9 bits (79), Expect = 0.091
Identities = 28/170 (16%), Positives = 61/170 (35%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
++ +K + +Q+ +K R + + + +K+ +R+ K
Sbjct: 1066 RRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRK 1125
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
++RK +K + + ++ K R K K K + K + RK ++
Sbjct: 1126 RRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRK 1185
Query: 555 XXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREEN 704
+ R + K + + K +K K+R K + +K EN
Sbjct: 1186 RRRKRKRRRKRKR-RRKRKRRRKRKRRRKRKRRRKRKRRRKRKSLMSREN 1234
Score = 33.5 bits (73), Expect = 0.48
Identities = 33/169 (19%), Positives = 62/169 (36%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
K+ ++ K ++K K+ + K K K ++K RK K
Sbjct: 1033 KRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRK-RRRKRKRR 1091
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
+KRK +K + + +K K R K K + K + + R+ +++
Sbjct: 1092 RKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRR 1151
Query: 555 XXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREE 701
+ R + K + + K +K K+R K K +K K R +
Sbjct: 1152 RKRQRRRKRKR---RRKRKRRRKRKRRRKRKRR--RKRKRRRKRKRRRK 1195
Score = 32.7 bits (71), Expect = 0.85
Identities = 32/169 (18%), Positives = 62/169 (36%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
K+ ++ K ++K K+ + K K K ++K +R+ K
Sbjct: 1057 KRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKR---KRRRKRK 1113
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
++RK +K K + ++ K R K K + + K + RK ++
Sbjct: 1114 RRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRK 1173
Query: 555 XXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREE 701
+ R + K + + K +K K+R K K +K K R +
Sbjct: 1174 RRRKRKRRRKRKR-RRKRKRRRKRKRRRKRKRR--RKRKRRRKRKRRRK 1219
Score = 31.5 bits (68), Expect = 2.0
Identities = 32/169 (18%), Positives = 62/169 (36%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
K+ ++ K ++K K+ + K K K ++K RK K
Sbjct: 1045 KRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRK-RRRKRKRR 1103
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
+KRK +K + + +K K R + K + K + + R+ +++
Sbjct: 1104 RKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRR 1163
Query: 555 XXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREE 701
+ R + K + + K +K K+R K K +K K R +
Sbjct: 1164 RKRKRRRKRKR---RRKRKRRRKRKRRRKRKRR--RKRKRRRKRKRRRK 1207
Score = 31.1 bits (67), Expect = 2.6
Identities = 31/165 (18%), Positives = 60/165 (36%)
Frame = +3
Query: 207 QKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN*KKRK 386
++ K ++K K+ + K K K ++K +R+ K ++RK
Sbjct: 1031 RRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR---QRRRKRKRRRK 1087
Query: 387 XSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENPXXKX 566
+K K + ++ K R K K K + K + R+ ++ +
Sbjct: 1088 RKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRK 1147
Query: 567 XXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREE 701
R + K + + K +K K+R K K +K K R +
Sbjct: 1148 RQRRRKRQR-RRKRKRRRKRKRRRKRKRR--RKRKRRRKRKRRRK 1189
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 33.1 bits (72), Expect = 0.64
Identities = 36/148 (24%), Positives = 48/148 (32%), Gaps = 3/148 (2%)
Frame = +3
Query: 219 KXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN*KKRKXSTX 398
K K KNKK N+K K K K ++ +N K K +
Sbjct: 391 KNKTKNKKDKTK--NNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKENKDKTKENKD 448
Query: 399 KK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKX---KTKXXXKEXKXRKDEQENPXXKXX 569
K K K K+NK N +N K KTK + K KD+ +N K
Sbjct: 449 KT-KENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTK 507
Query: 570 XXXXXRGXGKXKTXXKIEXKXXKKXKKR 653
K KT + K K +
Sbjct: 508 ENKDKTNENKDKTKENKDKTKENKNKTK 535
Score = 31.5 bits (68), Expect = 2.0
Identities = 28/113 (24%), Positives = 37/113 (32%)
Frame = +3
Query: 360 KXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKD 539
K KN K + K K K K NK N +N K KTK + K KD
Sbjct: 400 KTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKEN----KDKTKENKDKTKENKD 455
Query: 540 EQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXRE 698
+ + K K KT + K K + K+K +E
Sbjct: 456 KTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTKE 508
Score = 30.3 bits (65), Expect = 4.5
Identities = 30/124 (24%), Positives = 42/124 (33%)
Frame = +3
Query: 360 KXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKD 539
K K K + + K K K K+NK N +N K KTK + K KD
Sbjct: 414 KTKENKDKTKNNKDKTKENKDKTKENKDKTKENKDKTKEN----KDKTKENKDKTKENKD 469
Query: 540 EQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREENXXLXX 719
+ + K K KT + K K + K K + + +EN
Sbjct: 470 KTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTK-ENKDKTNENKDKTKENKDKTK 528
Query: 720 XXKN 731
KN
Sbjct: 529 ENKN 532
Score = 30.3 bits (65), Expect = 4.5
Identities = 29/118 (24%), Positives = 40/118 (33%), Gaps = 3/118 (2%)
Frame = +3
Query: 360 KXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKX---KTKXXXKEXKX 530
K KN K + K K K K+NK N +N K KTK + K
Sbjct: 421 KTKNNKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKE 480
Query: 531 RKDEQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREEN 704
KD+ + K K KT + K K + K K + + +EN
Sbjct: 481 NKDKTKENKDKTKENKDKTKNNKDKTKENKDKTNENKDKTK-ENKDKTKENKNKTKEN 537
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,626,184
Number of Sequences: 59808
Number of extensions: 71716
Number of successful extensions: 152
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5258524096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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