SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K24
         (1602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    42   0.008

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 41.5 bits (93), Expect = 0.008
 Identities = 27/85 (31%), Positives = 35/85 (41%)
 Frame = +3

Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
           KK  +K  + K+K KK  +     K K   K      +  KKK          ++K KN 
Sbjct: 8   KKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNK 67

Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTR 449
           KK+K    KK K    K KK K  R
Sbjct: 68  KKKKKKKKKKKKKKRKKKKKKKKKR 92



 Score = 40.7 bits (91), Expect = 0.015
 Identities = 28/118 (23%), Positives = 44/118 (37%)
 Frame = +3

Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
           KK  +K  K K+K KK  +     K K   K      +  KKK          ++K K  
Sbjct: 10  KKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKK 69

Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQE 548
           KK+K    KK K    K KK K  +        +     + + +   +  + R+  +E
Sbjct: 70  KKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKE 127



 Score = 39.5 bits (88), Expect = 0.034
 Identities = 28/123 (22%), Positives = 44/123 (35%)
 Frame = +3

Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
           KK  +K  K K+K KK  +     K K   K      +  KKK          ++K K  
Sbjct: 7   KKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 66

Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
           KK+K    KK K    K KK K  +        +     + + +   +  + R+  +   
Sbjct: 67  KKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRK 126

Query: 555 XXK 563
             K
Sbjct: 127 EGK 129



 Score = 38.3 bits (85), Expect = 0.078
 Identities = 26/114 (22%), Positives = 42/114 (36%)
 Frame = +3

Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
           KK  +K  K K+K +K  +     K K   K      +  KKK          ++K K  
Sbjct: 2   KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61

Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRK 536
           KK+K    KK K    K KK K  +        +     + + +   +  + R+
Sbjct: 62  KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRR 115



 Score = 37.9 bits (84), Expect = 0.10
 Identities = 27/125 (21%), Positives = 47/125 (37%)
 Frame = +3

Query: 315 KKKXXMXXXXGGXERKXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXK 494
           KKK          +RK K  KK+K    KK K    K KK K  +        K     K
Sbjct: 2   KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61

Query: 495 XKTKXXXKEXKXRKDEQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKX 674
            K K   K+ K +K +++    K       R   + +   +   +  ++ ++R   + + 
Sbjct: 62  KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRR 121

Query: 675 XQKEK 689
            ++ K
Sbjct: 122 RRRRK 126



 Score = 37.1 bits (82), Expect = 0.18
 Identities = 26/124 (20%), Positives = 47/124 (37%)
 Frame = +3

Query: 315 KKKXXMXXXXGGXERKXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXK 494
           KKK          ++K K  KK+K    KK K    K KK K  +        K     K
Sbjct: 4   KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63

Query: 495 XKTKXXXKEXKXRKDEQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKX 674
            K K   K+ K +K +++    K       +   + +   +   +  ++ ++R   + + 
Sbjct: 64  KKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 123

Query: 675 XQKE 686
            +KE
Sbjct: 124 RRKE 127



 Score = 36.3 bits (80), Expect = 0.31
 Identities = 28/127 (22%), Positives = 42/127 (33%)
 Frame = +3

Query: 219 KXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN*KKRKXSTX 398
           K K+K KK  +     K K   K      +  KKK          ++K K  KK+K    
Sbjct: 3   KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62

Query: 399 KK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENPXXKXXXXX 578
           KK      K KK K  +        K     K + +   +  + R+  +     +     
Sbjct: 63  KKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR 122

Query: 579 XXRGXGK 599
             R  GK
Sbjct: 123 RRRKEGK 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,469,618
Number of Sequences: 237096
Number of extensions: 419977
Number of successful extensions: 948
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23957124682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -