BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K24
(1602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 42 0.008
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 41.5 bits (93), Expect = 0.008
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
KK +K + K+K KK + K K K + KKK ++K KN
Sbjct: 8 KKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNK 67
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTR 449
KK+K KK K K KK K R
Sbjct: 68 KKKKKKKKKKKKKKRKKKKKKKKKR 92
Score = 40.7 bits (91), Expect = 0.015
Identities = 28/118 (23%), Positives = 44/118 (37%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
KK +K K K+K KK + K K K + KKK ++K K
Sbjct: 10 KKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKK 69
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQE 548
KK+K KK K K KK K + + + + + + + R+ +E
Sbjct: 70 KKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKE 127
Score = 39.5 bits (88), Expect = 0.034
Identities = 28/123 (22%), Positives = 44/123 (35%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
KK +K K K+K KK + K K K + KKK ++K K
Sbjct: 7 KKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 66
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENP 554
KK+K KK K K KK K + + + + + + + R+ +
Sbjct: 67 KKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRK 126
Query: 555 XXK 563
K
Sbjct: 127 EGK 129
Score = 38.3 bits (85), Expect = 0.078
Identities = 26/114 (22%), Positives = 42/114 (36%)
Frame = +3
Query: 195 KKXXQKXXKXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN* 374
KK +K K K+K +K + K K K + KKK ++K K
Sbjct: 2 KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61
Query: 375 KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRK 536
KK+K KK K K KK K + + + + + + + R+
Sbjct: 62 KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRR 115
Score = 37.9 bits (84), Expect = 0.10
Identities = 27/125 (21%), Positives = 47/125 (37%)
Frame = +3
Query: 315 KKKXXMXXXXGGXERKXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXK 494
KKK +RK K KK+K KK K K KK K + K K
Sbjct: 2 KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61
Query: 495 XKTKXXXKEXKXRKDEQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKX 674
K K K+ K +K +++ K R + + + + ++ ++R + +
Sbjct: 62 KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRR 121
Query: 675 XQKEK 689
++ K
Sbjct: 122 RRRRK 126
Score = 37.1 bits (82), Expect = 0.18
Identities = 26/124 (20%), Positives = 47/124 (37%)
Frame = +3
Query: 315 KKKXXMXXXXGGXERKXKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXK 494
KKK ++K K KK+K KK K K KK K + K K
Sbjct: 4 KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63
Query: 495 XKTKXXXKEXKXRKDEQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKX 674
K K K+ K +K +++ K + + + + + ++ ++R + +
Sbjct: 64 KKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 123
Query: 675 XQKE 686
+KE
Sbjct: 124 RRKE 127
Score = 36.3 bits (80), Expect = 0.31
Identities = 28/127 (22%), Positives = 42/127 (33%)
Frame = +3
Query: 219 KXKQKNKKXXRXXXNSKXKXXXKXPPXPXEXXKKKXXMXXXXGGXERKXKN*KKRKXSTX 398
K K+K KK + K K K + KKK ++K K KK+K
Sbjct: 3 KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
Query: 399 KK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQENPXXKXXXXX 578
KK K KK K + K K + + + + R+ + +
Sbjct: 63 KKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR 122
Query: 579 XXRGXGK 599
R GK
Sbjct: 123 RRRKEGK 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,469,618
Number of Sequences: 237096
Number of extensions: 419977
Number of successful extensions: 948
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23957124682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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