Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K24
         (1602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical p...    36   0.061
Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical pr...    32   1.3  
Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    30   5.3  

>U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical
           protein C33G8.2 protein.
          Length = 390

 Score = 36.3 bits (80), Expect = 0.061
 Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 4/174 (2%)
 Frame = +3

Query: 195 KKXXQKXXKXKQK--NKKXXRXXXNSKXKXXXKXPPXPXEXXK--KKXXMXXXXGGXERK 362
           KK  Q   K KQ+  +KK      + K K   K      E  K  KK          E K
Sbjct: 120 KKRKQMRDKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDK 179

Query: 363 XKN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDE 542
            K+ KK+K    ++ K    K KK K  +  +     +N    K K K   K+ K  KD+
Sbjct: 180 KKDKKKKKDDNDEEEK---EKDKKKKDKKKDDDDDEDEN---DKKKDK---KKKKDDKDD 230

Query: 543 QENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREEN 704
            EN   K       +   +     + E    KK KK+     +  +K+K ++++
Sbjct: 231 DENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKD 284


>Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical
           protein C11G6.3 protein.
          Length = 385

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +3

Query: 492 KXKTKXXXKEXKXRKD-EQENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKH 668
           K K     KE   RK+ E+E    K       R   + K   K   K  +K K+R   + 
Sbjct: 202 KQKELLKEKERSERKEKERELEREKEKSREKEREKEREKEREKEREKEREKQKEREKERE 261

Query: 669 KXXQKEKXREE 701
           K  +KEK REE
Sbjct: 262 KEREKEKKREE 272


>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 25/112 (22%), Positives = 39/112 (34%)
 Frame = +3

Query: 366 KN*KKRKXSTXKK*KTXXTKIKKNKXTRXXNXSXXXKNXXGXKXKTKXXXKEXKXRKDEQ 545
           K+ +K K    K+ K    K ++ K           K         +   K    +K+E 
Sbjct: 62  KDEEKDKEEAEKE-KNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEES 120

Query: 546 ENPXXKXXXXXXXRGXGKXKTXXKIEXKXXKKXKKRIXXKHKXXQKEKXREE 701
           +    +        G  + K   K E K  +K KK      K  +KEK +EE
Sbjct: 121 KEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEE 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,651,748
Number of Sequences: 27780
Number of extensions: 63283
Number of successful extensions: 146
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4649746304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)