Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K22
(846 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 175 9e-45
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 173 3e-44
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 140 3e-34
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 118 1e-27
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 96 5e-21
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 30 0.36
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 2.5
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 2.5
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 2.5
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.3
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 4.4
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 27 4.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.8
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 26 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 175 bits (425), Expect = 9e-45
Identities = 87/115 (75%), Positives = 90/115 (78%)
Frame = +1
Query: 139 PFPSXIETAGDVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLG 318
P IETAG VMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLG
Sbjct: 396 PLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLG 455
Query: 319 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSK 483
KFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSK
Sbjct: 456 KFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSK 510
Score = 53.2 bits (122), Expect = 4e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 482 RXEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMXG*EAQGKDL*L*QADHP 661
+ EI+RMV EAEKY+ ED+ + IQAKN LESY +S+++++ + K +
Sbjct: 510 KEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVD 569
Query: 662 RQVQRHHQVAGXXQLADKEEYXHKQKE 742
+ V+ + A K+E+ KQKE
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKE 596
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = +2
Query: 8 NGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 142
NGKE KSINPDE +L GD SE+ QDLLLLDV PL
Sbjct: 353 NGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPL 397
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 612 DEKLKEKISDSDKQTILDKCNDTIKWLDXTSWPTRRSMXTSRKNXKXXQSDXXXMXQVAG 791
D LK+K+ SDK+T+ +TI+WLD + + +K + + AG
Sbjct: 553 DPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQAG 612
Query: 792 GXPXG 806
G P G
Sbjct: 613 GAPGG 617
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 173 bits (421), Expect = 3e-44
Identities = 86/115 (74%), Positives = 90/115 (78%)
Frame = +1
Query: 139 PFPSXIETAGDVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLG 318
P IETAG VMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLG
Sbjct: 396 PLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLG 455
Query: 319 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSK 483
KFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSK
Sbjct: 456 KFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSK 510
Score = 58.0 bits (134), Expect = 2e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +2
Query: 482 RXEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMXG*EAQGKDL*L*QADHP 661
+ EI+RMV+EAEKY+ ED+ + IQAKN LESY +S+++++ + K +
Sbjct: 510 KEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAID 569
Query: 662 RQVQRHHQVAGXXQLADKEEYXHKQKEXXG 751
+ V+ + A K+EY KQKE G
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEG 599
Score = 50.8 bits (116), Expect = 2e-07
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +2
Query: 8 NGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 142
NGKE KSINPDE IL GD SE+ QDLLLLDV PL
Sbjct: 353 NGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPL 397
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 612 DEKLKEKISDSDKQTILDKCNDTIKWLDXTSWPTRRSMXTSRKNXKXXQSDXXXMXQVAG 791
D LK+K+ SDK+ I +TI+WLD + + +K + + AG
Sbjct: 553 DPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQAG 612
Query: 792 GXPXG 806
G P G
Sbjct: 613 GAPGG 617
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 140 bits (338), Expect = 3e-34
Identities = 71/116 (61%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Frame = +1
Query: 139 PFPSXIETAGDVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLG 318
P IET G VMT LI RN DNQ VLIQV+EGER +TKDNNLLG
Sbjct: 425 PLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLG 484
Query: 319 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSK 483
KF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+
Sbjct: 485 KFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSE 540
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 488 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMXG*EAQG 628
+IERMV EAE++ ED KE I+A+N LE+Y +S+K E G
Sbjct: 542 DIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLG 588
Score = 32.3 bits (70), Expect = 0.089
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 11 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 142
GK+ +K INPDE +L G++ + +++LLDV PL
Sbjct: 385 GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPL 426
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 612 DEKLKEKISDSDKQTILDKCNDTIKWLD 695
DE+L K+ DKQ +LD D +WL+
Sbjct: 584 DEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 118 bits (284), Expect = 1e-27
Identities = 56/112 (50%), Positives = 73/112 (65%)
Frame = +1
Query: 136 TPFPSXIETAGDVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLL 315
TP IET G V T LI RN +D Q V I+VF+GER + +DN L+
Sbjct: 438 TPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLI 497
Query: 316 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKG 471
G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G
Sbjct: 498 GNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG 549
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 488 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 607
EIE MV +AEKYR D +KE I+ N ES C ++S +
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNL 593
Score = 33.1 bits (72), Expect = 0.051
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +2
Query: 14 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 142
+E KS+NPDE +L G V+DL+LLDVTPL
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPL 440
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 96.3 bits (229), Expect = 5e-21
Identities = 47/117 (40%), Positives = 65/117 (55%)
Frame = +1
Query: 139 PFPSXIETAGDVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLG 318
P + G+V + RN +DNQ V V++GER +N LG
Sbjct: 401 PLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLG 460
Query: 319 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKXR 489
+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +
Sbjct: 461 EFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTK 517
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 8 NGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDLLLLDVTPL 142
+G+ LNKSINPDE +L + S++ QDLLLLDV PL
Sbjct: 357 DGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPL 402
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 30.3 bits (65), Expect = 0.36
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 396 RYPQRFRYREVHQQGEQDHHYQRQRSSLQGKRSSVWLMRQRSTETRMTSKRRPSR 560
R P R +YRE H + + H R RS + R ++ R T + P R
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSD-RYTERENPDR 373
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 131 VTPLFPRXLRLLEMS*PHSSSVTLPSPL 214
V PLFP +RL++ + P S+S + SP+
Sbjct: 229 VYPLFPHGIRLIDSANPSSNSGNVYSPV 256
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 453 HYQRQRSSLQGKRSSVWLMRQRSTETRMTSKR 548
HYQR + L R +W+ STET +T KR
Sbjct: 572 HYQRSKRKLF-TRLYIWMKDGDSTETSLTFKR 602
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 131 VTPLFPRXLRLLEMS*PHSSSVTLPSPL 214
V PLFP +RL++ + P S+S + SP+
Sbjct: 229 VYPLFPHGIRLIDSANPSSNSGNVYSPV 256
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 413 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 276
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 500 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 604
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 131 VTPLFPRXLRLLEMS*PHSSSVTLPSPL 214
V PLFP +RL++ + P ++S + SP+
Sbjct: 309 VYPLFPHGIRLIDSTKPEANSGNVYSPV 336
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 26.6 bits (56), Expect = 4.4
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 456 YQRQRSSLQGKRSSVWLMRQRSTETRMTSKRRPSRPRMHWNLTASA*SLPWXDEKLKEKI 635
YQ +R + + SS S+ +R +K PS R H+ L L EKL+E+
Sbjct: 286 YQSKRRRVSARASS-----SASSSSRTQAKSIPSHERTHYRLIRQHPELEHVWEKLEEEA 340
Query: 636 SDSDKQ 653
KQ
Sbjct: 341 PREVKQ 346
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 197 TLPSPLNRLRHSPPTLITNPEYSSKYLR 280
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 EIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTM 607
E+ EAE DK ET+ KNALE Y + ++ +
Sbjct: 554 EVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKL 594
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,640,974
Number of Sequences: 5004
Number of extensions: 46148
Number of successful extensions: 195
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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