Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K21
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   1.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   1.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   1.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   1.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   1.4  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    24   1.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   1.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.8  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   1.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.2  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   4.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 645 YMGQXC--RPGACATXXCMNGG 704
           +MG+ C  +   CAT  C NGG
Sbjct: 330 FMGRHCESKVNFCATSPCQNGG 351


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 112 SGIRSNSTTSRCGSTRGRSGCSVVYQC 192
           SG  S+   ++ G  R  S CSV Y C
Sbjct: 435 SGNESDGVCTKEGIVRDPSDCSVYYTC 461


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 259 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 294


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 259 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 294


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 259 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 294


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 215 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 250


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 259 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 294


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 47  LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 82


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 123 IKQHDISLWIDERQVRMFSGISMQVFAIVNGHVSPY 230
           + +  I +W   R+++      M    IV  H+SPY
Sbjct: 259 LTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPY 294


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 187 DIPLNIRTCLSSIHSEMSCCLIGSLNPRRPAPSVSDITSTAPAQSRAP 44
           D PL+ +   S +++ +S     +L+P R +PS   I+S +  +S +P
Sbjct: 37  DTPLSFKNIESHLNA-ISQITNSTLDPGRKSPSSPRISSPSSTKSGSP 83


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 305 IEEEILLQFDTLKSSDLKILKAPVLSIKTQGRVPKTAK 418
           I  E  L  DT+   D K    PV+S+K +  +P+  K
Sbjct: 199 IYSEQSLSPDTVFGDDGKSEDVPVISLKNENELPQQHK 236


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = +1

Query: 79  CRSRSEPVAGGSGIRSNSTTSRCGSTRGRSGCSVVYQCKCSPL*TVTSRPTCWTRTFPIS 258
           C   S    G  G+      S  G+  GR+G S+ +   CS + + +S+P   T+    +
Sbjct: 144 CTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCS-INSTSSQPV-GTQIHQQT 201

Query: 259 SRSYLPKLA 285
           + ++ P +A
Sbjct: 202 NHTFYPWMA 210


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -1

Query: 208 TMANTCIDIPLNIRTCL--SSIHSEMSCCLIGSLNPRRPAPSV 86
           T++  C D P N + C     I  + +   I  +N + P PSV
Sbjct: 68  TLSKACYDCPYNTQDCYREDCIPGDGNKRSIIVVNRKMPGPSV 110


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 180 GISMQVFAIVNGHVSPYVLDPNFSNKLPIIPSEVGYVNFTWKSKKRYYYNST 335
           G+S   F I+ G VSP+V+     +  P+  S    ++F +     YYY +T
Sbjct: 25  GLSALGFLIIAGCVSPFVIG-YVKHFHPLALSNKNAIDFNY-----YYYAAT 70


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 450 LPTHGSIILNSLAVFGTRPCV 388
           LP H  + +  +A  G RPCV
Sbjct: 55  LPNHIRLKIVEMAANGIRPCV 75


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 395 GRVPKTAKEFSIILPCVG 448
           GR P T  +F  I+ C+G
Sbjct: 158 GRAPLTYHQFLAIIACMG 175


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 166 SGCSVVYQCKCSPL*TVTSRPTCWTRTFP 252
           SG S   +C+ +P+  V   P C  +  P
Sbjct: 33  SGASTTDECQVTPVIHVLQYPGCVPKPIP 61


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 269 YDRELIGKVRVQHVGRDVTVHNGEHL 192
           Y  +L+G + V H     T +  +HL
Sbjct: 225 YVEDLVGHIEVNHSAPITTCNKKQHL 250


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 304 NRRRDITTIRHLEVI*SQNIESTC 375
           NRR +I    H ++I   NIE  C
Sbjct: 226 NRRGEIFYYMHQQIIARFNIERLC 249


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 258 LPI--IPSEVGYVNFTWKSKKRYY 323
           LP+  + SE   + F+W SKK +Y
Sbjct: 210 LPVNGVTSEKCNLTFSWYSKKVFY 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,131
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 29
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)