Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K21
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0622 - 11310941-11311472,11312776-11312813,11312875-113129...    31   1.2  
11_06_0444 + 23633129-23633183,23633409-23633446,23633967-236340...    31   1.6  
09_04_0105 - 14633097-14635529                                         29   3.7  
06_03_0094 + 16573075-16573268,16574636-16574996                       29   3.7  
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400...    29   4.9  
08_02_0249 - 14770259-14770344,14770434-14770514,14770606-147710...    29   4.9  
04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916     29   6.5  

>09_02_0622 -
           11310941-11311472,11312776-11312813,11312875-11312926,
           11313891-11314270
          Length = 333

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 40  RWGRGSAQELCW*CRSRSEPVAGGSGIRSNSTTSRCGSTRGRSGC 174
           RW RG    L W     +  + GG G  +++T  R GS  G  GC
Sbjct: 21  RWRRGGPG-LAWRSAEAAGRLDGGGGASADATGRRRGSAAGSKGC 64


>11_06_0444 +
           23633129-23633183,23633409-23633446,23633967-23634001,
           23634353-23634753,23634845-23634925,23635015-23635100
          Length = 231

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = -3

Query: 347 MTSRCRIVVISLLRFPREVYVANFGRYDRELIGKVRVQHVGRDVTVHNGEHLH*YTTEHP 168
           ++S C +   S     +E Y+  F R   E I K +   +       NG  +  +     
Sbjct: 106 VSSFCDVQTYSFDAMKKEYYICGFAR-SIESIPKYKYLKI--KYGTENGVWIKFFMLNLE 162

Query: 167 DLPLVDPQRDVVLFDRIPE 111
            +P VDP++DVV  ++ PE
Sbjct: 163 AIPYVDPEKDVVANEKDPE 181


>09_04_0105 - 14633097-14635529
          Length = 810

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 56  LRRSCAGDVAHARSRSPGVQGSDQTARHLAVDRREAGPDVQWYINASVRHCERSRLALRA 235
           LR S     AH R+ S     + + A HL    R   PD+   + A +    R+R A RA
Sbjct: 6   LRSSTPLAAAHLRALSAFAPRAGEGAPHLFGGMRPRAPDLLARLPAELASFARARAAGRA 65

Query: 236 GPELF 250
            P  F
Sbjct: 66  APSQF 70


>06_03_0094 + 16573075-16573268,16574636-16574996
          Length = 184

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 119 IPEPPATGSERERHHQHSSCAEPRPHRGRSPHAEL 15
           +P PP    E  R+H+H++C    P R   P   L
Sbjct: 25  LPPPPPPALEDARNHRHTTCPRLPPVRRAPPRRHL 59


>11_06_0189 -
           21039217-21039348,21039480-21039738,21039841-21040004,
           21040371-21040533,21040615-21042137
          Length = 746

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 103 AGGSGIRSNSTTSRCGSTRGRS 168
           A GS +RSN   + C S RGRS
Sbjct: 243 AAGSNVRSNQQAAACTSARGRS 264


>08_02_0249 -
           14770259-14770344,14770434-14770514,14770606-14771006,
           14771358-14771392,14771913-14771950,14772176-14772230
          Length = 231

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/79 (26%), Positives = 34/79 (43%)
 Frame = -3

Query: 347 MTSRCRIVVISLLRFPREVYVANFGRYDRELIGKVRVQHVGRDVTVHNGEHLH*YTTEHP 168
           ++S C     S     +E Y+  F R   E I K +   +       NG  +  +     
Sbjct: 106 VSSFCDAQTYSFDAMKKEYYICGFAR-SIESIPKYKYLKI--KYGTENGVWIKFFMLNLE 162

Query: 167 DLPLVDPQRDVVLFDRIPE 111
            +P VDP++DVV  ++ PE
Sbjct: 163 AIPYVDPEKDVVANEKDPE 181


>04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916
          Length = 234

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/17 (58%), Positives = 15/17 (88%), Gaps = 1/17 (5%)
 Frame = -3

Query: 116 PEPPATGS-ERERHHQH 69
           P PP++GS +R+RHH+H
Sbjct: 85  PNPPSSGSRDRDRHHRH 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,127,577
Number of Sequences: 37544
Number of extensions: 492944
Number of successful extensions: 1653
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)