Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K21
         (880 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.033
SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15)                   31   0.93 
SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.2  
SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.6  
SB_36636| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.7  

>SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 505

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 335 TLKSSDLKILKAPVLSIKTQGRVPKTAKEFSIILPCVGNSSGVATFEIGL 484
           T++SSD + +  PV S+  +G +  + KEFS+   C G  +G+    + L
Sbjct: 71  TVQSSDTESMPHPVPSLAAEGLISHSKKEFSMSFGCTGRKAGLVEVSLRL 120


>SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15)
          Length = 165

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 569 TRXCDKKCAXQGWCTXXKICQCPXGVHG 652
           TR CD  C     C   + C+CP G +G
Sbjct: 65  TRICDHPCPYGMTCVAPRTCRCPKGYYG 92


>SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 263

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 169 RTCLSSIHS-EMSCCLIGSLNPRRPAPSVSDITSTAP 62
           R CL+SI S +   CL G +N   P P V+ ITST P
Sbjct: 199 RPCLTSITSTDPQPCLTG-INTTEPPPRVTSITSTDP 234


>SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 996

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 177 SGISMQVFAIVNGHVSPYVLDPNFSNKLPIIPSEV 281
           SG+++  F    G V PYVL P  + ++PI+ + V
Sbjct: 404 SGLALDRFMTSTGPVEPYVLPPRQTLRVPIVSTPV 438


>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1409

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 584 KKCAXQGWCTXXKICQCPXG 643
           K+CA +G CT  K CQC  G
Sbjct: 538 KECAGRGICTNQKKCQCEAG 557


>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5834

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 578 CDKKCAXQGWCTXXKICQCPXGVHGA 655
           CDK+C   G C   K C C  G  GA
Sbjct: 178 CDKECDSHGVCRDGK-CSCDKGYRGA 202


>SB_36636| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 407

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 37  PRWGRGSAQELCW*CRSRSEPVAGGSGIRSNSTTSRCGSTRGRS 168
           P W  GS    CW C + S  + G +   S +T +  G+++ +S
Sbjct: 40  PNWKSGSRVSACWSCTTSSSHMNGENNKESVNTEAE-GNSKAKS 82


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,491,099
Number of Sequences: 59808
Number of extensions: 522535
Number of successful extensions: 1443
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)