Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K20
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.67 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.88 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 20/85 (23%), Positives = 39/85 (45%)
 Frame = +3

Query: 282 WVL*XFAVYQSRHKHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTPSSSTNGTETLVP 461
           W+      Y+    H  ++D ++R   +  + KE  AL++  ++      S    ET++ 
Sbjct: 66  WIFSCIGYYKLNKIHDAYKDLNQR---YGALCKEE-ALWNFPMIS---VFSRQDIETIIR 118

Query: 462 EDNLYALMPPFETFLNVDKTARLRH 536
            ++ Y L PP E   +  +T R R+
Sbjct: 119 RNSRYPLRPPQEVISHYRRTRRDRY 143


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +3

Query: 408  LLEDTPSSSTNGTETLVPEDNLYALMPPFE-TF-LNVDKTARLRHFFDNVKTGEL 566
            +L   P S   GT  ++P+DN    +P  E  F LNV+        ++ + T +L
Sbjct: 1047 ILNLRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVETAKTNEEMWELIDTEKL 1101


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
 Frame = -3

Query: 685  PTGKKALTLMSATYLEVGPAVQRTLSIIPDAVLLITAPM----ISSPVFTLSKKCLNLAV 518
            PTG+  L  ++ T L   P +    +I PD+  L+T       ++  V  +S   L  A 
Sbjct: 722  PTGQLLLDYLTDTVLAYKPKILGKPTISPDSRHLVTLDKQETGVTLVVQEISSDGLKFAF 781

Query: 517  -LSTFRNVSNGGINAYKLSSGTRVSVPLVDDEGV 419
             + T  N+S+  +   + + G  +    +D E +
Sbjct: 782  DVKTTLNISDIALYPSQTTHGYDIYASSIDKENI 815



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 768 VXPXTDKMVCGXKGV 812
           V P T + VCG KG+
Sbjct: 533 VIPGTQEHVCGVKGI 547


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 353 PLATILEG-EVLMSRLVYSKVLKHPRRF*LNHLLLSQTPTFF 231
           P+ T L   + L+ R VY+ V+ HP    L+   +S T  F+
Sbjct: 80  PIKTALSVCKSLIERQVYAVVVSHPLTGDLSPAAVSYTSGFY 121


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 118 FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 219
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 229 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 262


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 118 FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 219
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 267 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,327
Number of Sequences: 438
Number of extensions: 4339
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)