SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K16
         (853 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      323   1e-88
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       320   1e-87
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      273   1e-73
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             190   9e-49
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                160   2e-39
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)             124   7e-29
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)             103   1e-22
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              74   1e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   3e-07
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)                   31   1.6  
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)               30   2.7  
SB_16673| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)              29   3.6  
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)                   29   4.8  
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)                   29   4.8  
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)                  29   4.8  
SB_47196| Best HMM Match : Extensin_2 (HMM E-Value=0.02)               29   4.8  
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  323 bits (793), Expect = 1e-88
 Identities = 153/186 (82%), Positives = 169/186 (90%)
 Frame = +2

Query: 221 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 400
           YVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D  V  DM HWPF V+ +G +
Sbjct: 41  YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100

Query: 401 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 580
           PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG  V +AV+TVPAYF+DSQRQATKD
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160

Query: 581 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVK 760
           AGTI+GLNVLRIINEPTAAAIAYGLDKK   ERNVLI+DLGGGTFDVS+LTIEDGIFEVK
Sbjct: 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVK 220

Query: 761 STAGDT 778
           STAGDT
Sbjct: 221 STAGDT 226



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/37 (59%), Positives = 23/37 (62%)
 Frame = +1

Query: 97  MAKAPAVGIDXXXXXXXXXVSSXHGKVEIIANDQGQQ 207
           MAK PAVGID         V   HGKVEIIANDQG +
Sbjct: 1   MAKTPAVGIDLGTTYSCVGVFQ-HGKVEIIANDQGNR 36


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  320 bits (785), Expect = 1e-87
 Identities = 152/187 (81%), Positives = 172/187 (91%), Gaps = 1/187 (0%)
 Frame = +2

Query: 221 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 400
           YV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD  K
Sbjct: 41  YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100

Query: 401 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 580
           PKI+V YKGE KTF  EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKD
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160

Query: 581 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEV 757
           AGTI+GLNVLR+INEPTAAA+AYGLDK  +GE+NVLIFDLGGGTFDVSILTI+DG +FEV
Sbjct: 161 AGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEV 220

Query: 758 KSTAGDT 778
           KSTAGDT
Sbjct: 221 KSTAGDT 227



 Score = 37.5 bits (83), Expect = 0.014
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 97  MAKAPAVGIDXXXXXXXXXVSSXHGKVEIIANDQGQQ 207
           M KAPA+GID         V   +GKVEIIANDQG +
Sbjct: 1   MGKAPAIGIDLGTTYSCVGVFQ-NGKVEIIANDQGNR 36


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  273 bits (669), Expect = 1e-73
 Identities = 131/187 (70%), Positives = 158/187 (84%), Gaps = 1/187 (0%)
 Frame = +2

Query: 221  YVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG 397
            YVAFT+  ERLIGD AKNQ+  NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV    
Sbjct: 738  YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797

Query: 398  KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 577
            KP ++V  K E KTF  EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATK
Sbjct: 798  KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857

Query: 578  DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 757
            DAG I+GL V+RIINEPTAAAIAYG+DKK  GE+N+L+FDLGGGTFDVS+LTI++G+FEV
Sbjct: 858  DAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEV 916

Query: 758  KSTAGDT 778
             +T GDT
Sbjct: 917  VATNGDT 923


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  190 bits (464), Expect = 9e-49
 Identities = 94/109 (86%), Positives = 100/109 (91%)
 Frame = +2

Query: 452 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 631
           ++SSMVL KMKETAEAYLG  V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270

Query: 632 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 778
           AAAIAYGLDKK   ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDT
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDT 319



 Score =  186 bits (452), Expect = 3e-47
 Identities = 98/147 (66%), Positives = 108/147 (73%), Gaps = 25/147 (17%)
 Frame = +2

Query: 221 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 400
           YVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D  V+ DMKHW FEVV++ G+
Sbjct: 41  YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100

Query: 401 PKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETAEAYL 505
           PK+KV YKGE KTFF EEV                         SSMVL KMKETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160

Query: 506 GKTVQNAVITVPAYFNDSQRQATKDAG 586
           G  V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 161 GCKVTDAVVTVPAYFNDSQRQATKDAG 187



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = +1

Query: 97  MAKAPAVGIDXXXXXXXXXVSSXHGKVEIIANDQGQQ 207
           M KAPA+GID         V   HGKVEIIANDQG +
Sbjct: 1   MTKAPAIGIDLGTTYSCVGVFQ-HGKVEIIANDQGNR 36


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score =  160 bits (388), Expect = 2e-39
 Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
 Frame = +2

Query: 224 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GK 400
           VAFTD   L+G+ A +Q  +NP NTI+DAKR IG+ F    +    K + F V +D  G 
Sbjct: 71  VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130

Query: 401 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 580
               V  KG      PEE+   V+ K++  AE  L  TV  AV++VPA F+  QR AT  
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVK 190

Query: 581 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVK 760
           A +++G+ VLR+INEPTAAA+AYGL KK  G  NV++ DLGGGT DVS+L I+ G+F   
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTM 249

Query: 761 STAGD 775
           + AG+
Sbjct: 250 AMAGN 254


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score =  124 bits (300), Expect = 7e-29
 Identities = 68/166 (40%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
 Frame = +2

Query: 284 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 460
           N  NTI   KR IGRKF D  VQ ++ H P++VV        I+V Y G+ + F PE+V 
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177

Query: 461 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 640
           +M+ T++K TAE  L   V + VI+VP+Y+ D QR+   DA   +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237

Query: 641 IAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 769
           +AYG+ K+       RNV+  D+G  +  V I     G  +V STA
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTA 283


>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
          Length = 179

 Score =  103 bits (248), Expect = 1e-22
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 26/118 (22%)
 Frame = +2

Query: 407 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 586
           I V   GE ++F PE++S++VL ++K  AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2   IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61

Query: 587 TISGLN------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 682
           TI+GL+                        VLRIINEPTAAAIAYGLDK   G  ERN
Sbjct: 62  TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
 Frame = +2

Query: 401 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 580
           P +K  Y+  D TF PEE+  M+L   +   E +    +++ V+TVP +FN ++R+A   
Sbjct: 68  PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126

Query: 581 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL 730
           A  + GLNVL+I+N  TA A+ YGL ++     T E++ + +D+G  +   +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180


>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)
 Frame = +2

Query: 683 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 778
           + ++DLGGGTFD+SIL I+ G+FEVK+T GDT
Sbjct: 2   IAVYDLGGGTFDISILEIQKGVFEVKATNGDT 33


>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
          Length = 634

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 683 VLIFDLGGGTFDVSILTIEDGIFEVK 760
           V I+DLG GT++++IL  E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344


>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
          Length = 600

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 689 IFDLGGGTFDVSILTIEDGIFEV 757
           +FDLG G+++V  L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333


>SB_16673| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 529

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 750 SR*NPPPATPTWGGEDFDNRMV 815
           SR NPPPA  TW  +D DN+ V
Sbjct: 240 SRGNPPPAV-TWSWKDIDNKTV 260


>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
          Length = 799

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 780 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 664
           +++PA+   S +PS  V +D   VP P   I+  +  VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305


>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
          Length = 420

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 305 RILCCWGSSPPGSWRH 258
           R++CC G SP   WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410


>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1324

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
 Frame = -1

Query: 766 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 599
           G F L D+   G++GH EG+ +EV   + ++   +  F +T    S S   F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344

Query: 598 ---ARDGTC 581
              AR  TC
Sbjct: 345 VYNARISTC 353



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -2

Query: 810  CDCQSPHPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAA 631
            C    P PP   S  +  +S IP+      TSK PP  + +ST  SP        A+  A
Sbjct: 1255 CKRCPPEPP--TSSIMQSSSNIPT------TSKTPPSSTCLSTAVSPAAGADSNNAVNVA 1306

Query: 630  VGSLMIRRTF 601
            + SL++   F
Sbjct: 1307 ISSLVLPSLF 1316


>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
          Length = 340

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 305 RILCCWGSSPPGSWRH 258
           R++CC G SP   WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185


>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
          Length = 1080

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = +2

Query: 467  VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 616
            V  K   T+E Y+G T          + NA +T+P YF     + +K  G   G+ +   
Sbjct: 994  VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051

Query: 617  INEPTAAAIAYGLDKKGTG 673
            +++     I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070


>SB_47196| Best HMM Match : Extensin_2 (HMM E-Value=0.02)
          Length = 376

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 801 QSPHPPKWVSPAVDFTSKIPSSMVRMDTSKVPPP 700
           Q P PP W +P  DF   +P     +D ++   P
Sbjct: 222 QDPPPPPWTAPEPDFLLTLPGPDTTVDKARARYP 255


>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 833

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 696 TSAAVPSTCPSLPSRMVSSR*NPPPATP 779
           T  A P   P++PSR   +R  PPP  P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811


>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = -2

Query: 495  SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 316
            S   F+F ST  + +S +KV+ SPL  + +    P+     G    S C V   NL    
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165

Query: 315  RLASNIVL 292
            ++++  VL
Sbjct: 1166 KISNATVL 1173


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,135,592
Number of Sequences: 59808
Number of extensions: 552775
Number of successful extensions: 1813
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -