Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K14
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 38 0.002
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 32 0.089
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 32 0.12
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 32 0.12
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 30 0.36
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 30 0.48
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 1.5
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 27 2.5
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 27 4.4
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 5.9
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 26 5.9
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 26 5.9
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 37.9 bits (84), Expect = 0.002
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Frame = +1
Query: 31 YKCQLCYKGFIDTEARRHHVSKHSPSAGAI-ECPVCKFRFENKRQFQKHASNHEKKYACN 207
YKC LC K F E + H+ H+ + P C RF + +HA H +
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Query: 208 YCDHVSATTTQAKQHQRWHRGRHVQVPTLRRGVHQVDVVPEPRTHEAPLGVYMRRVRLLL 387
+A A+ +++ T GVH + P + + V++ +V + +
Sbjct: 86 NAAAAAAANNSARSSN--SPAGNLEPSTNNAGVHMTNASMNPNVNPS-YPVFIPQVGMSV 142
Query: 388 REP 396
P
Sbjct: 143 APP 145
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 32.3 bits (70), Expect = 0.089
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +1
Query: 121 ECPVCKFRFENKRQFQKHASNH--EKKYACNY--CDHVSATTTQAKQHQRWHRGRHVQVP 288
ECP CK F + +H +H EK + C+Y C + +H R H + + P
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVTP 64
Query: 289 --TLRRGVHQV-DVVPE 330
TL +H+ D PE
Sbjct: 65 EQTLDVNLHKAPDSKPE 81
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +2
Query: 242 RSSTSAGTGGVTYKC--QHCDEVSTKWTSYLSHVRMKHPSE-FICGACGSSFVSRLGLAM 412
+ S + G + YKC Q C + T+ H R S+ FIC C SSF L
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 413 HKTMMH-KDLDEKSEAGP 463
H H K D S+ P
Sbjct: 65 HVNQKHVKQNDAGSQTHP 82
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 10 LITLNAQYKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKH 174
LI + C C K F E H + HS A I CP C+ + + K ++H
Sbjct: 24 LIDSKRVFPCDQCAKRFTRHENLTRHKACHS-KAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +1
Query: 31 YKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKH 174
++C +C K F +R H H+ A C C RF +H
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHT-GIKAFACVTCNQRFARMDALNRH 646
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.48
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 31 YKCQL--CYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKH 174
Y C + C K F + A + H+S A C C +F K Q+H
Sbjct: 236 YHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
Score = 29.1 bits (62), Expect = 0.83
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Frame = +2
Query: 281 KCQHC--DEVSTKWT--SYLSHVRMKHPSE--FICG--ACGSSFVSRLGLAMHKTMMHKD 436
K HC +E K++ S L H +E F+C C +F + L +HK H +
Sbjct: 21 KIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRC-HTN 79
Query: 437 LDEKSEAGPYCAECDVQFASLEAYKRHMVTSVKHAELTLTNNGCRVC 577
+ S + CD QF + + +RH+ K T GC C
Sbjct: 80 VKPFS---CHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDEC 123
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Frame = +1
Query: 46 CYKGFIDTEARRHHVSKHSPSAGAIECPV--CKFRFENKRQFQKHASNHEKKYACNYCDH 219
C + F + R H+S C C+ RF K++ Q H + +K C H
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 220 VSATTTQA--KQHQRWHRGRHVQVPT 291
S + K Q + R VP+
Sbjct: 180 ESCVGHEGFEKWSQLQNHIREAHVPS 205
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 437 LDEKSEAGPYCAECDVQFASLEAYKRHM 520
L EK G C C+ +F SLEA + HM
Sbjct: 251 LAEKISIGFTCLTCNREFKSLEAVRAHM 278
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 129 WTLYCTRAG*VLGDVMSPG 73
W LYC AG ++GD M G
Sbjct: 289 WELYCQEAGGIIGDEMGLG 307
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = +1
Query: 22 NAQYKCQLCYKGFIDTEARRHHVSKHSP---SAGAIECPVCKFRFENKRQFQKHASNHE- 189
+ +Y C Y G AR+++V H S C +CK F ++H HE
Sbjct: 440 DGKYVC--LYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHEN 497
Query: 190 -KKYAC 204
+ Y C
Sbjct: 498 GRPYVC 503
Score = 26.6 bits (56), Expect = 4.4
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 278 YKCQH--CDEVSTKWTSYLSHVRMKHPSE--FICGACGSSFVSRLGLAMHKTMMHKDLDE 445
Y C + C++ + + SH++ H S+ + C C + FV H H + E
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQT-HLSDRPYRCDLCKAGFVRH-----HDLKRHLRIHE 496
Query: 446 KSEAGPYCAECDVQFASLEAYKRH 517
PY EC +F L+A RH
Sbjct: 497 NGR--PYVCECLKRFNRLDALNRH 518
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 82 HHVSKHSPSAGAIECPVCKFRFENKRQFQKHASNHEKK 195
HH++ HSP + A + + KF ++Q+ E K
Sbjct: 687 HHLTSHSPESIAFKAVLAKFFANKTARYQEKLGKAEFK 724
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 281 KCQHCDEVSTKWTSYLSHVRMK 346
+C CD+VST W + + +R K
Sbjct: 309 ECDDCDDVSTAWYAMANRMRGK 330
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = +1
Query: 130 VCKFRFENKRQFQKHASNHEKKYACNYCDHVSATTTQAKQHQRWHRGRHVQVPTLRRGVH 309
+C E+ RQF K KY C H + H RW R H +R
Sbjct: 484 LCNKWEEHSRQFAKCRRCRRTKYCSKECQHQA-----WPGHSRWCRVIHKDGRNSKRESS 538
Query: 310 QVDVVPEPRTHEAP 351
+++ V E + +P
Sbjct: 539 KINSVTESESTASP 552
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,708,718
Number of Sequences: 5004
Number of extensions: 50203
Number of successful extensions: 215
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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