Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K14
(849 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62850.1 68416.m07061 zinc finger protein-related contains Pf... 33 0.24
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 33 0.32
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 32 0.42
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 32 0.55
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 31 0.73
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 31 1.3
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 30 1.7
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 30 2.2
At5g07240.1 68418.m00826 calmodulin-binding family protein conta... 29 3.0
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 29 3.0
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 29 3.9
At2g25780.1 68415.m03094 hypothetical protein 29 5.2
At4g31800.1 68417.m04517 WRKY family transcription factor 28 6.8
At4g22760.1 68417.m03286 pentatricopeptide (PPR) repeat-containi... 28 6.8
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 9.0
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 28 9.0
At5g20670.1 68418.m02455 expressed protein 28 9.0
At4g21670.1 68417.m03139 double-stranded RNA-binding domain (DsR... 28 9.0
At4g14990.1 68417.m02303 expressed protein 28 9.0
At1g54095.1 68414.m06165 expressed protein 28 9.0
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 28 9.0
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR... 28 9.0
>At3g62850.1 68416.m07061 zinc finger protein-related contains Pfam
profiles PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger, C2H2 type
Length = 472
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 374 CGSSFVSRLGLAMHKTMMHKDLDEKSEAGP--YCAECDVQFASLEAYKRHMVTSVKHAEL 547
CG ++ R L + + E P YC C Q S+E ++RH V+S KHA
Sbjct: 151 CGE-WIWRNLLETKREFVQDKCSSSCEVSPMFYCKSCSYQGQSVEGFRRH-VSSGKHAVK 208
Query: 548 TLTN 559
+TN
Sbjct: 209 EVTN 212
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/81 (22%), Positives = 29/81 (35%)
Frame = +1
Query: 25 AQYKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKHASNHEKKYAC 204
+ +KC++C K F +A H H P + + K + QK + Y C
Sbjct: 41 SSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYEC 100
Query: 205 NYCDHVSATTTQAKQHQRWHR 267
C + H + HR
Sbjct: 101 KVCGKIFGCYRGLGGHTKLHR 121
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 28 QYKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPV 132
+YKC+ C+K FI+ A H+ H + A C +
Sbjct: 3 RYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVI 37
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +1
Query: 46 CYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKHASNH--EKKYACNY--C 213
C K F D A R H H + C +F + + ++H H E+ Y C Y C
Sbjct: 86 CGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGC 145
Query: 214 DHVSATTTQAKQHQRWH 264
+ + H + H
Sbjct: 146 GKAFSLDFNLRSHMKTH 162
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/96 (22%), Positives = 45/96 (46%)
Frame = +2
Query: 275 TYKCQHCDEVSTKWTSYLSHVRMKHPSEFICGACGSSFVSRLGLAMHKTMMHKDLDEKSE 454
++ C++C + + H+R+ H +E G G+ + L + MM + ++ +
Sbjct: 8 SFLCKYCYKTFPSGKALGGHIRI-HTNENSVGYNGNK---KKRLVDQRKMMAQKHKQQQQ 63
Query: 455 AGPYCAECDVQFASLEAYKRHMVTSVKHAELTLTNN 562
G C EC F SL+A + HM + ++ + +N
Sbjct: 64 VG--CRECGRVFVSLKALRGHMACHGEVKKMLMDDN 97
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 31 YKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKHASNHEKKYACNY 210
+KC +C K F +A H + HS A +E ++ K S K + C+
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGAD---AGEKTRSKMLSPSGKIHKCDI 249
Query: 211 CDHVSATTTQA-KQHQRWH 264
C HV T QA H+R H
Sbjct: 250 C-HVLFPTGQALGGHKRRH 267
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 284 CQHCDEVSTKWTSYLSHVRMKHPSEFICGACGSSFVSRLGLAMHKTMMHKD-LDEKSEAG 460
C +CD + H + KH F C C + G+ +H +HK+ + + A
Sbjct: 14 CYYCDREFDDEKILVQHQKAKH---FKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNAK 70
Query: 461 PYCAECDVQFASLEAYKRHMVTS 529
D++ ++ H++T+
Sbjct: 71 DGRDSTDIEIYGMQGIPPHVLTA 93
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/122 (22%), Positives = 43/122 (35%)
Frame = +2
Query: 347 HPSEFICGACGSSFVSRLGLAMHKTMMHKDLDEKSEAGPYCAECDVQFASLEAYKRHMVT 526
H ++ C CG SF S L HKT K + DV ++ ++
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGHKTSHRKPV-----------SVDVNNSNGTVTNNGNIS 138
Query: 527 SVKHAELTLTNNGCRVCGETFGSGHELXXXXXXXXXXXXXXNYGXEATNLTWPLKCDQCS 706
+ + T+N C +C ++F SG L + G + L DQ S
Sbjct: 139 NGLVGQSGKTHN-CSICFKSFPSGQALGGHKRCHYDGGNGNSNGDNSHKFDLNLPADQVS 197
Query: 707 QE 712
E
Sbjct: 198 DE 199
>At5g07240.1 68418.m00826 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 401
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 624 ATTPRSAPRTTGKKPPTSLGPSSAISAHKRCIARA 728
A RS+ + PPT + PSS S H RC++ A
Sbjct: 164 ARASRSSHVSDSSHPPTLMIPSSPQSFHARCVSEA 198
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 31 YKCQLCYKGFIDTEARRHHVSKH 99
YKC++C+K F++ +A H+ H
Sbjct: 4 YKCRVCFKSFVNGKALGGHMRSH 26
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 34 KCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKHASN--HEKKYACN 207
KC++C A H+++ H+P I C +CK E + F H ++ C
Sbjct: 37 KCKICGDMVPKKHAEEHYLNTHAP----IACSMCKETIE-REIFDSHKGEICPKRIVTCE 91
Query: 208 YCD 216
+C+
Sbjct: 92 FCE 94
>At2g25780.1 68415.m03094 hypothetical protein
Length = 153
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 281 KCQHCDEVSTKWTSYLSHVRMKHPSEFICGACGSSFVSRL 400
KC C Y++ VR + ++CG CG RL
Sbjct: 40 KCDCCGIEEECTMQYIAKVRNLYSGNWVCGLCGEVVTERL 79
>At4g31800.1 68417.m04517 WRKY family transcription factor
Length = 310
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +3
Query: 18 IERSVQVPALL----QGLHRHRGQETSRLQALTQRGCNRVSSVQVPLREQTPVPE-ARLQ 182
++RS + P+LL +G H H G S A +Q G + V+ V + + + R
Sbjct: 213 VQRSAEDPSLLVATYEGTHNHLGPNASEGDATSQGGSSTVTLDLVNGCHRLALEKNERDN 272
Query: 183 PREEVRLQLLRPRLRHDNPSEAAPALA 263
+EV +Q + L D+ AA A A
Sbjct: 273 TMQEVLIQQMASSLTKDSKFTAALAAA 299
>At4g22760.1 68417.m03286 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 889
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 284 CQHCDEVSTKWTSYLSHVRMKHPS 355
C HC ++ T T YLSH+ M + S
Sbjct: 791 CSHCVKLETDPTGYLSHLAMIYSS 814
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/84 (23%), Positives = 31/84 (36%)
Frame = +2
Query: 356 EFICGACGSSFVSRLGLAMHKTMMHKDLDEKSEAGPYCAECDVQFASLEAYKRHMVTSVK 535
++ C CG SF S L HKT K + +G + S V +
Sbjct: 96 DYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGN 155
Query: 536 HAELTLTNNGCRVCGETFGSGHEL 607
+ + C +C ++F SG L
Sbjct: 156 GVSQSGKIHTCSICFKSFASGQAL 179
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/78 (28%), Positives = 29/78 (37%)
Frame = +1
Query: 31 YKCQLCYKGFIDTEARRHHVSKHSPSAGAIECPVCKFRFENKRQFQKHASNHEKKYACNY 210
YKC +CYK F +A H + H G EN + S K + C+
Sbjct: 75 YKCGVCYKTFSSYQALGGHKASHRSLYGG---------GENDK---STPSTAVKSHVCSV 122
Query: 211 CDHVSATTTQAKQHQRWH 264
C AT H+R H
Sbjct: 123 CGKSFATGQALGGHKRCH 140
>At5g20670.1 68418.m02455 expressed protein
Length = 153
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 239 KRSSTSAGTGGVTYKCQHCDEVSTKWTSYLSHVRMKHPSEFICGACGSS 385
K SS+ VT C C +Y++ V+ +H ++CG C +
Sbjct: 15 KPSSSLPAVESVT--CDTCGFAEECTPAYINRVKERHKGHWLCGLCAEA 61
>At4g21670.1 68417.m03139 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 981
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 141 PLREQTPVPEARLQPREEVRLQLLRPRLRHDNPSEAAPALAQ 266
P RE+ VPE+ L P RL +L+ +P+ + P+ Q
Sbjct: 570 PAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQ 611
>At4g14990.1 68417.m02303 expressed protein
Length = 787
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 186 REEVRLQLLRPRLRHDNPSEAAPALAQG--ASRTSANTATRCPPSG 317
+ E+ +LLR LRH N + L G AS S +T TR SG
Sbjct: 732 KREMPAELLRASLRHTNEDQRNFLLNVGRSASPVSESTTTRASASG 777
>At1g54095.1 68414.m06165 expressed protein
Length = 150
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +2
Query: 281 KCQHCDEVSTKWTSYLSHVRMKHPSEFICGACGSS 385
+C+ C Y+ VR + +FICG C +
Sbjct: 20 RCECCGMKEEYTAGYIESVRCLYAGKFICGLCSEA 54
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +3
Query: 132 VQVPLREQTPVPEARLQPREEVRLQLLRPRLRHDNPSEAAPALAQGASRTSANTATRCPP 311
V P Q P+ LQP++ V+ RPR +P+ A G T PP
Sbjct: 219 VSRPEEIQIQPPQLPLQPQQPVKRPPGRPRKDGTSPTVKPAASVSGGVETVKRRGR--PP 276
Query: 312 SGR 320
SGR
Sbjct: 277 SGR 279
>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1544
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 298 RGVHQVDVVPEPRTHEAPLGVYMRRVRLLLREPPGAGH 411
RG H ++ +P+ HEA + + LL++ P G+
Sbjct: 838 RGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGN 875
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,037,325
Number of Sequences: 28952
Number of extensions: 292069
Number of successful extensions: 1286
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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