Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K13
         (831 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000150A5EA Cluster: hypothetical protein TTHERM_0052...    33   8.8  

>UniRef50_UPI000150A5EA Cluster: hypothetical protein
           TTHERM_00522170; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00522170 - Tetrahymena
           thermophila SB210
          Length = 321

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = -1

Query: 291 VLLSNKIV*SNKLYVVRNL*--RITIIVQNFIVIQGLV*KSMRHKQIDYCYIYFLNQ**Y 118
           +L SNK++ S  +   +NL   +I  I +  I I+GL  K+    QI+  Y     Q  Y
Sbjct: 53  ILNSNKLMKSQSILSKKNLNSEQINTICEEIISIKGL--KNNEKNQINLQYGLTSLQNLY 110

Query: 117 QSVEI*ASIFRLPVSI*NH 61
            S+EI  +I + PVSI  H
Sbjct: 111 NSIEILENIRKTPVSISQH 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,777,480
Number of Sequences: 1657284
Number of extensions: 9160608
Number of successful extensions: 18233
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18227
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)