Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K11
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1408 - 26353389-26355191 142 4e-34
03_03_0094 + 14378953-14380728 141 7e-34
04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955 133 2e-31
11_06_0293 + 22018128-22018556 97 2e-20
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 71 2e-12
05_01_0060 - 418559-418577,418655-418738,418857-418966,419467-41... 59 4e-09
07_03_0466 + 18474929-18475315,18476035-18476298,18476717-184767... 31 1.5
02_03_0279 + 17250347-17252098 29 4.7
12_01_0989 + 10048036-10048125,10048232-10048816,10048930-100493... 29 6.2
05_07_0163 - 28094574-28094726,28095248-28095382,28095771-280959... 28 8.2
>07_03_1408 - 26353389-26355191
Length = 600
Score = 142 bits (343), Expect = 4e-34
Identities = 60/91 (65%), Positives = 79/91 (86%)
Frame = +3
Query: 564 PRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHLGLMLGVGGQM 743
P LISAVKRQLRVRT+Y+SKLL+ D D+++ VFW+SCEAG+Y+RT+CVHLGL+LGVG M
Sbjct: 198 PPLISAVKRQLRVRTIYESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHM 257
Query: 744 IELRRVRSGIQGXKEGMXTMHDILNAQWSYE 836
ELRRVRSGI G ++ M TMHD+++A+W+ +
Sbjct: 258 QELRRVRSGILGEQDNMVTMHDVMDARWAMD 288
Score = 110 bits (265), Expect = 1e-24
Identities = 54/88 (61%), Positives = 66/88 (75%)
Frame = +1
Query: 310 PQLPEVVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNL 489
P EVV+WIKR+L+ +KTGHSGTLDPKVTG LIVC+DRATRLVKSQQ AGKEYV V
Sbjct: 114 PSSHEVVAWIKRLLRVDKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARF 173
Query: 490 HSAVENIQKVTQGLGEAAWSSIPEAPGL 573
H+AV + +V + L EA ++ + P L
Sbjct: 174 HAAVPDTARVARAL-EALTGAVFQRPPL 200
Score = 107 bits (256), Expect = 1e-23
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = +2
Query: 119 FKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVD 298
+ I+P V LDT+ WPLLLKN+DRLNVRT HYTPLP G+SPLKRPI++Y++ G IN+D
Sbjct: 50 YLIKPQSLVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPIAEYLRYGVINLD 109
Query: 299 KPSNPSS 319
KPSNPSS
Sbjct: 110 KPSNPSS 116
>03_03_0094 + 14378953-14380728
Length = 591
Score = 141 bits (341), Expect = 7e-34
Identities = 60/91 (65%), Positives = 78/91 (85%)
Frame = +3
Query: 564 PRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHLGLMLGVGGQM 743
P LISAVKRQLRVRT+Y+SKLL+ D D+++ VFW+SCEAG+Y+RT+CVHLGL+LGVG M
Sbjct: 202 PPLISAVKRQLRVRTIYESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHM 261
Query: 744 IELRRVRSGIQGXKEGMXTMHDILNAQWSYE 836
ELRRVRSGI G + M TMHD+++A+W+ +
Sbjct: 262 QELRRVRSGILGETDNMVTMHDVMDARWAMD 292
Score = 111 bits (268), Expect = 5e-25
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +1
Query: 310 PQLPEVVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNL 489
P EVV+WIKR+L+ EKTGHSGTLDPKVTG LIVC+DRATRLVKSQQ AGKEYV V
Sbjct: 118 PSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARF 177
Query: 490 HSAVENIQKVTQGLGEAAWSSIPEAPGL 573
H+AV + +V + L EA ++ + P L
Sbjct: 178 HAAVPDTARVARAL-EALTGAVFQRPPL 204
Score = 105 bits (251), Expect = 6e-23
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +2
Query: 119 FKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVD 298
+ I+P LDT+ WPLLLKN+DRLNVRT HYTPLP G+SPLKRPI++Y++ G IN+D
Sbjct: 54 YLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGVINLD 113
Query: 299 KPSNPSS 319
KPSNPSS
Sbjct: 114 KPSNPSS 120
>04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955
Length = 286
Score = 133 bits (321), Expect = 2e-31
Identities = 58/95 (61%), Positives = 79/95 (83%)
Frame = +3
Query: 549 LYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHLGLMLG 728
++ R P LISAVKRQLRVRT+Y+SKLL+ D ++++ VFW+SCEAG+Y+RT+CVHLGL+LG
Sbjct: 168 MFQRLP-LISAVKRQLRVRTIYESKLLEHDAERHLAVFWISCEAGTYVRTLCVHLGLLLG 226
Query: 729 VGGQMIELRRVRSGIQGXKEGMXTMHDILNAQWSY 833
VG M EL RVRSGI G ++ M TMHD+++A+ +
Sbjct: 227 VGAHMQELHRVRSGIHGEQDNMVTMHDVMDARQEF 261
Score = 99 bits (238), Expect = 2e-21
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = +1
Query: 325 VVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVE 504
VV+WIKR+L+ KTGHSGTLDPKVTG LIVC+DRATRLVKSQQ AGKEYV V H+A
Sbjct: 98 VVAWIKRLLRVNKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAA-- 155
Query: 505 NIQKVTQGLGEAAWSSIP 558
+ + + L A + +P
Sbjct: 156 DTARALEALTGAMFQRLP 173
>11_06_0293 + 22018128-22018556
Length = 142
Score = 96.7 bits (230), Expect = 2e-20
Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +1
Query: 325 VVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV- 501
VV+WIKR+L+ KTGHSGTLDPKVTG LIVC+D ATRLVKSQQ AGKEY V H+AV
Sbjct: 59 VVAWIKRLLRVNKTGHSGTLDPKVTGNLIVCVDLATRLVKSQQGAGKEYGCVARFHAAVP 118
Query: 502 ENIQKVTQGLGEAAWSSIPEA 564
+ + +A SS P +
Sbjct: 119 DTARDARSRRSQAPCSSAPRS 139
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +1
Query: 322 EVVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYV 474
EV++W K +L EKT H+GTLDPKVTG LIVC++RATRLVKS +YV
Sbjct: 45 EVITWNKNLLHIEKTSHNGTLDPKVTGNLIVCVNRATRLVKSWNGVMLKYV 95
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 239 NSPLKRPISDYVKSGFINVDKPSN 310
+SPLK+PI+ ++ G IN++KPSN
Sbjct: 17 HSPLKQPIAKHLCYGVINLNKPSN 40
>05_01_0060 -
418559-418577,418655-418738,418857-418966,419467-419577,
419914-419992,420182-420264,420347-420439,420902-421810
Length = 495
Score = 59.3 bits (137), Expect = 4e-09
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +1
Query: 337 IKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVENIQK 516
++R++ +K GH+GTLDP TG LIVC+ +AT++V Q K Y VF L A
Sbjct: 326 LRRLVNVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMVKGYSGVFRLGEATSTWDA 385
Query: 517 VTQGLGEAAWSSIPE 561
+ + W I +
Sbjct: 386 DSPVIQREPWEHIKD 400
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 639 QDKNIGVFWVSCEAGSYIRTMCVHLGLMLG 728
+D+ +F V C G+YIR++C LG LG
Sbjct: 460 EDRQNLIFRVICSKGTYIRSLCADLGKALG 489
>07_03_0466 +
18474929-18475315,18476035-18476298,18476717-18476755,
18476756-18476878,18477118-18477240
Length = 311
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +3
Query: 534 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLD-------FDQDKNIGVFWVSCEAGSYI 692
RSC + + PR I + + R + D +L + F ++ IG ++
Sbjct: 42 RSCSLVVASSPRSILELYEE-RAHELRDFRLAELRSATGNFSRELKIGEGGFGSVYKGFL 100
Query: 693 RTMCVHLGLMLGVGGQMIELRRVR-SGIQGXKE 788
+T C HLGL G ++ ++++ +G+QG K+
Sbjct: 101 KTSCGHLGLRNDSGNVVVAVKKLNPNGMQGHKQ 133
>02_03_0279 + 17250347-17252098
Length = 583
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -1
Query: 809 VVHCXHAFLXALNAGPYSSEFDHLTSHAKHQT*MHTHRPDIRSSLATNPEHPNILVLVEI 630
VVH H FL L+ G S +H H H H H I SS A++ +V + I
Sbjct: 345 VVHGLHGFLPPLSHGSCSHGSNH--RHHYHYQYHHHHHHIIASSAASSAATAASVVRIMI 402
Query: 629 QE 624
+E
Sbjct: 403 RE 404
>12_01_0989 +
10048036-10048125,10048232-10048816,10048930-10049331,
10049419-10049477,10049711-10049801,10050243-10050329,
10050723-10050791
Length = 460
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 487 LHSAVENIQKVTQGLGEAAWSSIPEAPGLYRP*SDNFVSGRCTTVNSWISTRTRILGCSG 666
LHSA EN + A SS+P+ + + GRC T N+ S++ +
Sbjct: 273 LHSAKENSSPPNNESDQQATSSVPQNRSILEAFQKSKNFGRCETGNAASSSKNLGTTIAA 332
Query: 667 LVARLDRISG 696
+++L+ +G
Sbjct: 333 RISQLESATG 342
>05_07_0163 -
28094574-28094726,28095248-28095382,28095771-28095923,
28096010-28096208,28096312-28096349,28096849-28097020,
28097666-28097788,28097869-28098284
Length = 462
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 576 SAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHLGLMLGVGGQMIEL 752
S ++ L +TVY+++++ FDQDK++ V + +R + V + L VG ++ +
Sbjct: 177 SDLRVTLADQTVYEAQVVGFDQDKDVAVLRIKAPTDK-LRPVPVGVSADLLVGQKVFAI 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,104,595
Number of Sequences: 37544
Number of extensions: 500894
Number of successful extensions: 1222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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