Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K11
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.9  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 18/65 (27%), Positives = 24/65 (36%)
 Frame = -1

Query: 758 SSEFDHLTSHAKHQT*MHTHRPDIRSSLATNPEHPNILVLVEIQEFTVVHRPDTKLSLHG 579
           S  F   T+  + Q   H   P IR  ++  P HP +L+          H P     LH 
Sbjct: 136 SDRFGKATAEQQQQP--HPQSPAIREPISPGPIHPAVLLPYPQHVLHPAHHP---ALLHP 190

Query: 578 RYKPG 564
            Y  G
Sbjct: 191 AYHTG 195


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 18/65 (27%), Positives = 24/65 (36%)
 Frame = -1

Query: 758 SSEFDHLTSHAKHQT*MHTHRPDIRSSLATNPEHPNILVLVEIQEFTVVHRPDTKLSLHG 579
           S  F   T+  + Q   H   P IR  ++  P HP +L+          H P     LH 
Sbjct: 136 SDRFGKATAEQQQQP--HPQSPAIREPISPGPIHPAVLLPYPQHVLHPAHHP---ALLHP 190

Query: 578 RYKPG 564
            Y  G
Sbjct: 191 AYHTG 195


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 426  AVYANDKATRNFRIERARMTSL 361
            AV AND A + F  +R ++TSL
Sbjct: 1151 AVQANDSAVQLFNFQRNKLTSL 1172


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 426  AVYANDKATRNFRIERARMTSL 361
            AV AND A + F  +R ++TSL
Sbjct: 1152 AVQANDSAVQLFNFQRNKLTSL 1173


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 370 HSGTLDPKVTGCLIVCIDRATRLVKS-QQNAGKEYVAVFNLHSAVENIQKVTQGLGEAAW 546
           H+  L P+     ++   R   L+     N+ KE++AV           K+ Q +    W
Sbjct: 12  HTTALTPRDYQTELLATAREENLIVCIAHNSAKEFLAV-----------KLIQSMRTNRW 60

Query: 547 SSIPEAPG 570
           SS PEAPG
Sbjct: 61  SSHPEAPG 68


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 764 PYSSEFDHLTSHAKHQT*MHTHRPDIRSSLATNPEHPNILVLVEIQEFTVVHRPDTKLSL 585
           P    F  L +HA          P   +SL T+  HP+I  +  I   T + +  TK S+
Sbjct: 572 PLHQPFPMLANHAGGGAIPEGQEPTSTTSLTTSAHHPDI--MSGIGSTTTISKELTKASI 629


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 149 KLDTAYWPLLLKNFDRLNVRTNHYTPLPFG 238
           K  T + P + ++FD  N+ T    PLP G
Sbjct: 350 KQSTWHDPRIPRDFDTQNLTTETLGPLPHG 379


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,115
Number of Sequences: 2352
Number of extensions: 19082
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)