Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K11
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   122   4e-28
U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode asta...    28   9.6  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  122 bits (293), Expect = 4e-28
 Identities = 57/99 (57%), Positives = 76/99 (76%)
 Frame = +3

Query: 549 LYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHLGLMLG 728
           L+ R P LISAVKRQLR+RTVY++K +++D  + +G+F   CE+G+Y+RT+CVHLGL+LG
Sbjct: 168 LFQRPP-LISAVKRQLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILG 226

Query: 729 VGGQMIELRRVRSGIQGXKEGMXTMHDILNAQWSYEXXK 845
            GGQM ELRR RSGI    E M TMHD+L+AQ+  +  K
Sbjct: 227 CGGQMQELRRNRSGICDENENMVTMHDVLDAQYLLDTQK 265



 Score =  118 bits (285), Expect = 4e-27
 Identities = 54/74 (72%), Positives = 60/74 (81%)
 Frame = +1

Query: 310 PQLPEVVSWIKRILKAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNL 489
           P   EVVSWIKRIL+ EKTGHSGTLDPKV+GCLIVCIDR TRL KSQQ AGKEY+ +F L
Sbjct: 88  PSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCLIVCIDRTTRLAKSQQGAGKEYICIFKL 147

Query: 490 HSAVENIQKVTQGL 531
           H  VE+ +KV Q L
Sbjct: 148 HEEVEDDRKVKQAL 161



 Score =  104 bits (250), Expect = 7e-23
 Identities = 48/90 (53%), Positives = 59/90 (65%)
 Frame = +2

Query: 50  LSEXXKXKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPL 229
           + +  K    +G  L   Q  G F++  S    KLD + WPLLLKN+D+LNVRTNHYTP 
Sbjct: 1   MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60

Query: 230 PFGNSPLKRPISDYVKSGFINVDKPSNPSS 319
             G SPLKR I +Y+ SGF N+DKPSNPSS
Sbjct: 61  VEGVSPLKRDIKNYISSGFFNLDKPSNPSS 90



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 512 KKSHRXLEKLRGALFQRPP 568
           +K  + LEKL GALFQRPP
Sbjct: 155 RKVKQALEKLTGALFQRPP 173


>U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical
           protein B0495.7 protein.
          Length = 895

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 73  KQGWCFVGSFSDDWRLQNRTFGEREEAGHRLLAFIVEKLRS 195
           K GW +   F ++WR++    G  + AG  +LA +   L+S
Sbjct: 317 KNGWFYHTEFDEEWRIEP---GAIQRAGENVLAVVRAILKS 354


>AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode astacin
           protease protein27 protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 527 PCVTF*IFSTAECKLKTATYSLPAFCCD 444
           PC     F+  E KL   T + P FCCD
Sbjct: 361 PCSMSCSFNALELKLSNFTMTGPRFCCD 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,255,151
Number of Sequences: 27780
Number of extensions: 414381
Number of successful extensions: 1105
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)