Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K10
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 145 4e-35
07_01_0578 + 4295386-4296489,4297394-4297507 144 6e-35
08_02_1278 - 25838146-25839411 32 0.66
10_02_0199 + 6668902-6669293,6669825-6669882 31 1.5
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 31 1.5
07_03_1026 - 23369298-23370326 30 2.0
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 30 2.0
03_05_0366 - 23505755-23506441 30 2.0
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 30 2.7
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 30 2.7
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.6
04_04_0347 + 24564589-24565296 25 5.8
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 6.1
03_05_0452 + 24464134-24464442 29 6.1
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 28 8.1
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 8.1
07_01_0380 - 2834080-2834451,2835945-2836130 28 8.1
02_04_0457 + 23093020-23093343,23093798-23093806 28 8.1
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 28 8.1
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 145 bits (351), Expect = 4e-35
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 369 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 548
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE
Sbjct: 94 AFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEF 153
Query: 549 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 728
PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKGPLI+
Sbjct: 154 PLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIV 213
Query: 729 FNKD-QGLTRAFRNIPGVELLNV 794
+ + + +AFRN+PGV++ NV
Sbjct: 214 YGTEGSKVVKAFRNLPGVDVANV 236
Score = 105 bits (251), Expect = 6e-23
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +2
Query: 176 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 355
V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 30 VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 89
Query: 356 SGQG 367
+GQG
Sbjct: 90 AGQG 93
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 734 QGSGSDSRFPQHPRCGAPECXKLNLLKLAPGGHFGR 841
+GS F P +LNLL LAPGGH GR
Sbjct: 217 EGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGR 252
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 144 bits (350), Expect = 6e-35
Identities = 69/143 (48%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 369 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 548
AFGNMCRGGRMFAPTK WR+WH ARGH IE +PEL
Sbjct: 95 AFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPEL 154
Query: 549 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 728
PLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKGPLI+
Sbjct: 155 PLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIV 214
Query: 729 FNKD-QGLTRAFRNIPGVELLNV 794
+ + + +AFRN+PGV++ NV
Sbjct: 215 YGTEGSKIVKAFRNLPGVDVANV 237
Score = 108 bits (259), Expect = 6e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +2
Query: 176 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 355
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 356 SGQG 367
+GQG
Sbjct: 91 AGQG 94
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 734 QGSGSDSRFPQHPRCGAPECXKLNLLKLAPGGHFGR 841
+GS F P +LNLL LAPGGH GR
Sbjct: 218 EGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGR 253
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 617 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 510
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 287 AESWGTGRAVARIPRVRGGGTHR 355
A+SW TGRA A + R R GG R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRR 58
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -3
Query: 440 ATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 264
AT A P + G H +T H T + Y +HHH H Q H + H PP
Sbjct: 352 ATQAAGPAIYGA-HPATQPHYTAAVAAQEYYHHHHHHL---QHHPAAAALVHHRAVAPP 406
>07_03_1026 - 23369298-23370326
Length = 342
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 497 DASSSNGCCQGRS-PLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRT 354
DA S+ GC + RS P+ AT PA R + T H D T
Sbjct: 190 DAESAQGCARTRSPPVRSARATTPAASPSRSKKETPVRAHAAVRGDDAT 238
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 608 EDDSLFGLVDLLDFVGYN--QGKLGNLFNNVSSSLNERWDASSSNGCCQGR 462
+DD +F V LLD VGYN +G++ N SL + W S CCQG+
Sbjct: 331 DDDVVFLHVKLLDLVGYNFISRTVGSILIN---SLLDAWH-SCVYICCQGK 377
>03_05_0366 - 23505755-23506441
Length = 228
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 349
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 350 H 352
+
Sbjct: 168 N 168
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -3
Query: 677 LTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERW 498
L S TLR VHL + QE + L L L VG N+ K G F + S L++
Sbjct: 947 LKSLHTLRHVHLAWGNTVI---QEIERLTQLRKL-GVVGINK-KNGPSFYSAISKLSQLE 1001
Query: 497 DASSSNGCCQGRSPLSEVDATVPAPPGLR 411
S G CQG S +T P P L+
Sbjct: 1002 SLSVCAGWCQGLHGTSSSSSTSPPPENLQ 1030
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 256 AVGLPRVLGHRNVNIIDQVRTYGRLEYEXGGAWLHPAPSHSSLNTPTLKV 107
A P+++ ++ DQ G LE G HPAP + SL +P LKV
Sbjct: 47 ACNQPKLILQLESHLKDQQVVRGALEKALGPDPDHPAPVNLSLESPMLKV 96
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -3
Query: 431 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 264
P PP + GG H + G P +G++ + P+ H++ PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.4 bits (53), Expect(2) = 5.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 401 HTSTTTHVTEGXPDRTYGYHHHGH 330
H V + P ++ +HHHGH
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3
Query: 353 YGYHHHGHA 327
+G+HHH HA
Sbjct: 99 HGHHHHRHA 107
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 731 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 600
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 229 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 330
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 427 AGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRLSS 606
A AST+ G RPW ++++R + R P+ W + RR+ R + +++
Sbjct: 8 AAAAASTARGGHRPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAA 67
Query: 607 S*GAS 621
GA+
Sbjct: 68 KAGAA 72
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 470 QGRSPLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHG 333
Q RSP + + P P G GG H S+++ + G + +HHHG
Sbjct: 102 QRRSPSTAPPPSPPQPSG-GGGHHHSSSS--SGGGGGGYHNHHHHG 144
>07_01_0380 - 2834080-2834451,2835945-2836130
Length = 185
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +2
Query: 275 HQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPH---EALAALAPSR 442
HQ S+ G A AR V G + SG G V P +A AA AP+
Sbjct: 92 HQGESSSGGGVSTAAARHCDVAGSSSSHSGSGSGSATPPRPALVSPRAGLQAAAAAAPTM 151
Query: 443 QPPTAESGLGSSR 481
P A SGL R
Sbjct: 152 NQPPAASGLSMKR 164
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 272 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 367
G + S W G A A VRGGG RSG G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGG 106
>01_06_1428 -
37301697-37302175,37302300-37302471,37302570-37303403,
37303847-37304012,37304334-37304573,37304765-37304905,
37305623-37305735,37306549-37306614,37307242-37307480,
37307615-37307897
Length = 910
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 830 DLPEPASGGSACXIQELHTGDVAESASQTLI 738
+LP PA GGSA ++ +HT +AS +L+
Sbjct: 575 ELPPPAGGGSALFVR-IHTAACDRAASASLV 604
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,756,390
Number of Sequences: 37544
Number of extensions: 614599
Number of successful extensions: 2059
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -