Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K09
(865 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 54 3e-08
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 37 0.003
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 37 0.003
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 37 0.003
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.006
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.007
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 36 0.010
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 35 0.013
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 35 0.017
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.017
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 34 0.023
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 34 0.030
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 34 0.030
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 33 0.052
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 33 0.069
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 32 0.12
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 31 0.16
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.21
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.21
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 31 0.21
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.28
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.28
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.37
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 30 0.37
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.37
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 30 0.37
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 30 0.49
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 30 0.49
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 30 0.49
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.64
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 29 0.85
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 29 0.85
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.85
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 1.1
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 28 2.0
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 27 2.6
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 27 2.6
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 3.4
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 27 3.4
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 3.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 4.5
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 4.5
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 4.5
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 4.5
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 4.5
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 26 6.0
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 26 6.0
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 26 6.0
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 26 6.0
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 26 6.0
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 26 6.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 7.9
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 26 7.9
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 7.9
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 7.9
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 54.0 bits (124), Expect = 3e-08
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Frame = +2
Query: 371 VFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNGIVLCTG 550
+ S + N + + G +G + LWDIR+ + ++ P+ C+ ++ TG
Sbjct: 61 IISCDQLNGVITCGSEGEIHLWDIRSQAKSAVRSWTQQST---PFTCIALNKKN-QFATG 116
Query: 551 SQLVDDDAYLVFFDQRKPKPLGGYWN-SHTDDVTQIKSPRLEWRSLXSGSLDGLINVYXI 727
S+L A + +D R + L WN +H DD+T ++ + L +GS+DGL+++
Sbjct: 117 SELTRSLASVQLWDVRSEQKLIRQWNDAHNDDITHLQFHPKDNELLLTGSVDGLVSLLDT 176
Query: 728 XXE-----XEEDALLYSLNVENSI 784
E EED LL+ +N SI
Sbjct: 177 TKEEDSTDPEEDPLLHVINHGASI 200
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 359 LTQVVFSPKEDNLLYSTGLDGLVKLWD 439
+T + F PK++ LL + +DGLV L D
Sbjct: 149 ITHLQFHPKDNELLLTGSVDGLVSLLD 175
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 37.1 bits (82), Expect = 0.003
Identities = 41/163 (25%), Positives = 66/163 (40%)
Frame = +2
Query: 317 LHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEIL 496
+H + L GH + V + P N+L S+ D +KLWD G + + + +++
Sbjct: 124 VHPIAELKGHSRK-VGLVQYHPTAANVLASSSADNTIKLWDCEKG----VAHVSLKMDVM 178
Query: 497 RPYECMDVSCNGIVLCTGSQLVDDDAYLVFFDQRKPKPLGGYWNSHTDDVTQIKSPRLEW 676
+ M + +G L T S+ D + +D R KP+ N H K+PR+ W
Sbjct: 179 --CQSMSFNADGTRLVTTSR----DKKVRVWDPRTDKPV-SVGNGHAG----AKNPRVVW 227
Query: 677 RSLXSGSLDGLINVYXIXXEXEEDALLYSLNVENSIDXLSWLD 805
GSLD + AL N+ I + LD
Sbjct: 228 ----LGSLDRFATTGFSKMSDRQIALWDPTNLSEPIGGFTTLD 266
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 323 QVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKD 478
QV GH A L ++P D +L S G D + +W + + + Y+D
Sbjct: 73 QVNLFRGHTAAVL-DTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYED 123
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 37.1 bits (82), Expect = 0.003
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = +2
Query: 176 KKYKIVTEHAVSLLHSYIHRLD----GTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHG 343
K + V EH + + HSY L +AI D+ + IY L V R G
Sbjct: 347 KLFDFVKEHVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKL--VARCQG 404
Query: 344 HKEATLTQVVFSP---KEDNL-LYSTGLDGLVKLWD 439
HK + +T V+F +DN + S GLD + LWD
Sbjct: 405 HK-SWVTDVIFDAWRCDDDNYRIASVGLDRKLLLWD 439
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 335 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSC 460
L GH E + + F P NL + G D L KLWD+RA C
Sbjct: 143 LKGH-EMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCC 183
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +2
Query: 251 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVK 430
S LA D +I I+ + Q L GH A L + S + + S DGLVK
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQT--LEGHTGAILKLIYIS--QGTQVVSAAADGLVK 574
Query: 431 LWDIRAGGSCVLEYKDEEEEI 493
+W + + G CV + E+ +
Sbjct: 575 VWSL-SSGECVATLDNHEDRV 594
Score = 30.7 bits (66), Expect = 0.28
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Frame = +2
Query: 251 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVK 430
S L + + IY++ ++ + H+ +T + + LL + G +GLVK
Sbjct: 73 SKKLIAAFRSRLLTIYEIPSG--RRIKSMKAHETPVITMTI--DPTNTLLATGGAEGLVK 128
Query: 431 LWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNGIVLCTGSQLVDDDAYLVFFDQRKPKP 610
+WDI AG ++ I C N VL +G+ DD+ + +D +
Sbjct: 129 VWDI-AGAYVTHSFRGHGGVI--SALCFGKHQNTWVLASGA----DDSRVRLWDLNSSRS 181
Query: 611 LGGYWNSHTDDVTQIK-SPRLEWRSLXSGSLDGLINVYXIXXEXEEDALLYSLNVENSID 787
+ + H+ + + P + L SGS D + V+ I ++ + + ++ V +S++
Sbjct: 182 M-AVFEGHSSVIRGLTFEPTGSF--LLSGSRDKTVQVWNI----KKRSAVRTIPVFHSVE 234
Query: 788 XLSWLD 805
+ W++
Sbjct: 235 AIGWVN 240
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
+A D I I+ S + + Q LHGH+E+ + V FSP + L S LD +KLW+
Sbjct: 432 IAAGSLDKVIRIWTSSGTLVEQ---LHGHEESVYS-VAFSP-DGKYLVSGSLDNTIKLWE 486
Query: 440 IR 445
++
Sbjct: 487 LQ 488
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 35.5 bits (78), Expect = 0.010
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
LA +D +I ++ L + + ++ L GH++ +T++ FSP E+ +L ST D +WD
Sbjct: 297 LATCSTDKTIALWDLRNLN-QRLHTLEGHEDI-VTKISFSPHEEPILASTSADRRTLVWD 354
Query: 440 I 442
+
Sbjct: 355 L 355
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 248 KSLNLAISLS-DNSIEIYKLS--DSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLD 418
K +L S+S D + ++ + D+S +H H + V F+P D +L + D
Sbjct: 245 KHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHS-GPIHSVAFNPHNDFILATCSTD 303
Query: 419 GLVKLWDIR 445
+ LWD+R
Sbjct: 304 KTIALWDLR 312
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 35.1 bits (77), Expect = 0.013
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
LA+S+S+ S+ I + + + H ++ T +S +++NLLYS G D + +D
Sbjct: 114 LAVSMSNGSVLIIDIDSGVIKNKWKEHDYEAWTCH---YSRQDNNLLYSGGDDAALVCYD 170
Query: 440 IRAGGSCV 463
R SC+
Sbjct: 171 QRIPNSCI 178
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 34.7 bits (76), Expect = 0.017
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 257 NLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFS----PKEDNLLYSTGLDGL 424
N A ++ D SI+ ++ + V ++ K+A L Q S ++ N L S G D
Sbjct: 265 NFATAVLDGSIQFWQKGSRTKRPVMKI---KDAHLPQQGISCLSFSQDGNYLLSRGEDNA 321
Query: 425 VKLWDIRAGGSCVLEYKD 478
+++WD+R CV E D
Sbjct: 322 LRVWDLRNSNKCVNERID 339
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 DNSIEI-YKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 442
D S+ + + D + + GH A +T + P + +TG D ++WD+
Sbjct: 173 DGSLIVRFSKGDQYIRNMYNTKGHI-AEITDGCWQPDSSQIFLTTGYDSTARIWDV 227
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.7 bits (76), Expect = 0.017
Identities = 41/185 (22%), Positives = 78/185 (42%)
Frame = +2
Query: 173 SKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKE 352
S+ Y + + L + + DG + + A D I+++ ++ + H
Sbjct: 328 SESYVLKQQSHYDALSTLQYSSDGQRIITGA---DDGKIKVWDMNSGFC--IVTFTQHTS 382
Query: 353 ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNG 532
A ++ + FS K N+L+S+ LDG V+ WD+ ++ + C+ V +G
Sbjct: 383 A-VSGLCFS-KRGNVLFSSSLDGSVRAWDLIR----YRNFRTFTAPSRVQFSCIAVDPSG 436
Query: 533 IVLCTGSQLVDDDAYLVFFDQRKPKPLGGYWNSHTDDVTQIKSPRLEWRSLXSGSLDGLI 712
++C GSQ D++ +F + L H V+ + S L SGS D +
Sbjct: 437 EIVCAGSQ----DSFEIFMWSVQTGQLLETLAGHEGPVSSL-SFNSSGSLLASGSWDKTV 491
Query: 713 NVYXI 727
++ I
Sbjct: 492 RIWDI 496
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 34.3 bits (75), Expect = 0.023
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +2
Query: 227 IHRLDGTK---SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNL 397
+H+LD + S L S D I+++ +SS G+ EA VVFSP E N
Sbjct: 137 VHKLDISSFHPSYVLTAS-QDGLIKLWDYKESS--STITFRGNSEAA-RDVVFSPSEPNE 192
Query: 398 LYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNGIVLCT 547
+ G+++ WDIR L+ +L C++ S NG+ L +
Sbjct: 193 FVAAYDSGILQKWDIRFPKLPFLKLAAHNGVVL----CVNYSPNGVFLAS 238
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 33.9 bits (74), Expect = 0.030
Identities = 31/103 (30%), Positives = 41/103 (39%)
Frame = +2
Query: 185 KIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLT 364
K+V H + L K LA+ I I+ + S V L GH E
Sbjct: 156 KVVQLHDFGATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIE--STKSVRSLKGHSE---- 209
Query: 365 QVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEI 493
+V DN L S G D ++ D+RA G C K E+EI
Sbjct: 210 RVAALAWNDNTLTSGGKDEVILHHDLRAPGCCAEMMKVHEQEI 252
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 33.9 bits (74), Expect = 0.030
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 341 GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRA 448
GHK+ T+T + SP ++ L S LD ++LWD+R+
Sbjct: 110 GHKQ-TVTSIDVSPADETFL-SASLDNTIRLWDLRS 143
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 33.1 bits (72), Expect = 0.052
Identities = 41/150 (27%), Positives = 62/150 (41%)
Frame = +2
Query: 278 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGS 457
D S++++ S+ + +L GH T V + P + LL S D LVK WD R G+
Sbjct: 185 DGSLKVWNFHMST--EELKLTGHGWDVKT-VDWHPSK-GLLASGSKDNLVKFWDPRT-GT 239
Query: 458 CVLEYKDEEEEILRPYECMDVSCNGIVLCTGSQLVDDDAYLVFFDQRKPKPLGGYWNSHT 637
C+ + I++ + N L T V D+ FD R K + H
Sbjct: 240 CIATLHGHKNTIMQASFQKNFGSN--YLAT----VSRDSTCRVFDLRAMKDV-RVLRGHE 292
Query: 638 DDVTQIKSPRLEWRSLXSGSLDGLINVYXI 727
DV + L L +G DG +N Y +
Sbjct: 293 KDVNCVTWHPLYPNLLTTGGSDGSVNHYSL 322
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 32.7 bits (71), Expect = 0.069
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 DGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVF-SPKEDNLLYSTGL 415
DG L +L D + ++ S+SS+ + GHK + ++ + P LY+
Sbjct: 139 DGDVFAWLISTLVDQN-STFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASE 197
Query: 416 DGLVKLWDIRAG 451
D +++WD+ G
Sbjct: 198 DNTIRIWDVSTG 209
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 31.9 bits (69), Expect = 0.12
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 171 SVRSIKLLRNMLFLFYTRIYTDWTEQNL*TWPLVSQTTQLKYTNLVIRHCIKFVACMDTR 350
S+ +L N++F F + + Q L + ++ T++LK+TN+ H +K ++
Sbjct: 999 SLDGFRLAMNVIFFFSMDLPRNAFMQTLTKFTHLNNTSELKWTNM---HALK--TLLEIS 1053
Query: 351 RQH*HKLCLVLRKTIYC-TQLDLMDL*SCGI*EQEAPVFWSTKMKRK 488
H KL + + C +QL+ + L S G+ P +TK RK
Sbjct: 1054 LAHGDKLRDSWKDVLLCISQLERVQLISAGVDINSLPDVSTTKPLRK 1100
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 31.5 bits (68), Expect = 0.16
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +2
Query: 218 HSYIHRLDGTK-SLN-LAISLSDNSIEIYKL----SDSSLHQVCRLHGHKEATLTQVVFS 379
H+ I+ +D K SLN A D+ I I++L S + + + L H +A + V F+
Sbjct: 18 HTPIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQA-VNVVRFN 76
Query: 380 PKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNGIVLCTGSQL 559
P E N+L + G +G + LW L EE + + Y + + C + GS++
Sbjct: 77 P-EGNILATAGDEGTIMLWVPTNTPITTLADDAEELALAKEYWKVKIVCRSM----GSEI 131
Query: 560 VD 565
D
Sbjct: 132 YD 133
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 221 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLL 400
S ++RL + + + + +Y ++ SS + GH +T + F + L
Sbjct: 41 SQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTN-NVTAIAFHC-DGKWL 98
Query: 401 YSTGLDGLVKLWDIRA 448
++ DG VK+WD+RA
Sbjct: 99 ATSSEDGTVKVWDMRA 114
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 248 KSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLV 427
KS +LA + D +I IY + + + + + H TQV + +N L STG D +
Sbjct: 533 KSTHLATASLDTNIHIYSV-ERPMKYIAMKNAHSLGA-TQVEWV--SENELLSTGSDAAI 588
Query: 428 KLWDI 442
K+W +
Sbjct: 589 KVWSV 593
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 350 EATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEI 493
+A + + PK NL + G DG+VK+WD+R + + + I
Sbjct: 546 DAGINMAQWQPK-GNLFVTGGSDGIVKVWDLRLNNPFIQNFTEMNSAI 592
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 GHKE-ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSC 460
G KE +T++ + FS K + LY+ D VK+WD+ G C
Sbjct: 295 GEKEYSTISDLCFS-KGNLFLYTGAFDNAVKVWDME-GNLC 333
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLW 436
L S D +I+ + D S V GH ++ + +PK+ N S+ LDG VK+W
Sbjct: 113 LLTSSDDMTIKCFNW-DMSWKCVQTFEGHSRYVMSLAI-NPKDTNTFASSCLDGTVKVW 169
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 30.7 bits (66), Expect = 0.28
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 341 GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDV 520
GH E + + P + +L+ S G D + ++WD+R+G S ++ +E +R M
Sbjct: 305 GHSEGIFS-IACQP-DGSLVSSGGNDAIGRIWDLRSGKSIMV-----LDEHIRQIVAMAW 357
Query: 521 SCNGIVLCTGS 553
S NG L T S
Sbjct: 358 SPNGYQLATSS 368
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 386 EDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYE 508
+ N LYS D V++WD+R+G + +++ LR Y+
Sbjct: 545 DSNHLYSGSYDNSVRIWDLRSGSPINIIPMEKKVNSLRLYQ 585
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 389 DNLLYSTGLDGLVKLWDIRAG 451
D + S +DGL+++WD+R G
Sbjct: 506 DAAVASGTVDGLIRIWDLRIG 526
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.37
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Frame = +2
Query: 335 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECM 514
++GH + T+ FSP + L + D +LWD + + K + C+
Sbjct: 130 MNGH-DGTIISAQFSPSTSSRLVTGSGDFTARLWDCDT-QTPIATMKGHTNWV----SCV 183
Query: 515 DVSCNGIVLCTGSQLVDDDAYLVFFDQRKPKPLGGYWNSHTDDVTQI------KSPRLEW 676
+ + ++ TGS D + F+D +K P+G HT + + +P
Sbjct: 184 AWAPDASIIATGSM----DNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGP 239
Query: 677 RSLXSGSLDGLINVYXI 727
L SGS D + ++ +
Sbjct: 240 YLLASGSKDNTVRIWNV 256
Score = 29.5 bits (63), Expect = 0.64
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +2
Query: 194 TEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVV 373
T+ ++L +H + LA DN++ I+ + +L + L GH A +T V
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTL--LFTLSGHT-APITCVR 276
Query: 374 FSPKEDNLLYSTGLDGLVKLWDIRAG 451
+ + N +YS+ D +++WD + G
Sbjct: 277 WGGQ--NWIYSSSYDKTIRIWDAKDG 300
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
+A + D+S+ ++ + L GH A + Q +S + LL S+ D +K+WD
Sbjct: 404 IATASFDSSVRLWDGKTGKF--LATLRGHV-AAVYQCAWST-DSRLLVSSSQDTTLKVWD 459
Query: 440 IRA 448
+R+
Sbjct: 460 VRS 462
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.37
Identities = 25/98 (25%), Positives = 43/98 (43%)
Frame = +2
Query: 353 ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNG 532
ATL V +D ++ S D V +WD+ + Y + C+D
Sbjct: 219 ATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVL-----CLDFCRRR 273
Query: 533 IVLCTGSQLVDDDAYLVFFDQRKPKPLGGYWNSHTDDV 646
+L +GS D+ ++ +D + +PL Y+ HTD+V
Sbjct: 274 NLLVSGS----SDSTIIIWDWQNRRPLKVYF-GHTDNV 306
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 353 ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 445
A + + +SP E N+ S DG ++WD+R
Sbjct: 292 AAVEDLQWSPSEKNVFSSCSCDGTFRIWDVR 322
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 299 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 442
K S S V H+ A + + + P ED+++ G D + LWD+
Sbjct: 371 KSSSSVATPVASFKWHR-APIYSIEWHPNEDSVIGVVGADNQISLWDL 417
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 359 LTQVVFSPKEDNLLYSTGLDGLVKLWDIR 445
+T + F PK+D S LD ++LW I+
Sbjct: 352 VTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
+A + +SI + + S L GH L V + PK + +L S DG +LWD
Sbjct: 162 IATAYRSSSIRLCDMQSGSYTH--SLSGHTGNVLA-VDWCPKNEFVLASGSADGTCRLWD 218
Query: 440 IR 445
IR
Sbjct: 219 IR 220
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.49
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 221 SYIHRLDGTKSLNLAISLS-DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNL 397
+Y+ +D L +S S D ++ I+ L D + ++ L H E ++ + + + L
Sbjct: 139 NYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRM--LPAHSEPIISVSISA--DGTL 194
Query: 398 LYSTGLDGLVKLWDIRAG 451
+ DG+ ++WD+ +G
Sbjct: 195 CATASYDGMARIWDVLSG 212
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.5 bits (63), Expect = 0.64
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 257 NLAISLSDNSIEIYKLSDSSL-HQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKL 433
N A L+ +S + +L D H V +GH + +T V +P + + + S +GL+ L
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQP-VTAVAIAP-DGHTMASADSEGLIHL 531
Query: 434 WDIRAG 451
WDI G
Sbjct: 532 WDIGTG 537
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 29.1 bits (62), Expect = 0.85
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 221 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQV 370
+Y+ L+ + NL IS+ ++ IEI + S S LH+V + K L Q+
Sbjct: 515 NYLLELEKSPKNNLLISMDESVIEIVQKSLSVLHKVTKKIDKKAQHLQQL 564
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 29.1 bits (62), Expect = 0.85
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 377 SPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEY 472
S +E N+ +T +DG++ +WD R S VL+Y
Sbjct: 360 SSEESNIFLTTSIDGVMNVWDHRMVDS-VLKY 390
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.85
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = +2
Query: 341 GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDV 520
GH ++ + ++F P++ L++ D V+ W + G EE + P C DV
Sbjct: 220 GH-QSNVYCLLFDPQDSEALWTASADKTVREWSLYQG-------IHEETRMEHPDVCTDV 271
Query: 521 SCNGIVLCTGS-QLVDDDAYLVFFDQRKPKPLGGYWNSHTDDVTQIKSPRLEWRS-LXSG 694
+ L G+ D + +D + ++ H + VT+I L+W+S L S
Sbjct: 272 ----LTLADGNIATACRDEEIRVWDTTTGN-VKDIYSGHYESVTKI----LQWKSYLISS 322
Query: 695 SLDGLINVYXI 727
SLD I V+ +
Sbjct: 323 SLDQTIRVWDL 333
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +2
Query: 323 QVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEE 487
Q+C+L GHK+ ++ + +S + + + G+D V+LW G + ++ +E
Sbjct: 96 QICQLTGHKD-SIVAIDWS-FDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDE 148
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 335 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEI 493
+ H +A + V +P D LL + D V LWD+R + + E+E+
Sbjct: 277 IQAHSKA-INAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEV 328
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
LA + +D ++ ++ L + ++ L GH++ + +SP ++ +L S+ D V +WD
Sbjct: 297 LATASADKTVALWDLRNP-YQRLHTLEGHEDEVYG-LEWSPHDEPILASSSTDRRVCIWD 354
Query: 440 IRAGG 454
+ G
Sbjct: 355 LEKIG 359
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 407 TGLDGLVKLWDIRAG 451
+G DG VKLWD+R G
Sbjct: 644 SGNDGSVKLWDVRTG 658
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 27.5 bits (58), Expect = 2.6
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 107 DIVDNEENDRDTVEPEELEQMFSKKYKIVTEHAVSLL-HSYIHRLDGTKSLNLAISLSDN 283
D + NDRD P E++Q +++K T+ + S + ++ H + L+ + S
Sbjct: 56 DSLSQSTNDRDIYSPREIDQ-YTRKVSSRTDPSTSTISNARQHPRNSVSRLSRSSSNVRQ 114
Query: 284 SIEIYKLSDSSLHQVCRLHGHKEATL-TQVVFSPKE-DNLLYSTGLDGLVKLW 436
+I K + + + L G A+L ++ F+ KE N + T G+ +LW
Sbjct: 115 QRDIPK-QNFKVRPLSPLRGQSPASLRSEESFTLKERQNAINKTRAFGM-RLW 165
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.1 bits (57), Expect = 3.4
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Frame = +2
Query: 236 LDGTKSLNLAISLSDNSIEIYKL------------SDSSLHQVCRLHGHKEATLTQVVFS 379
+ G ++ L SL +NSIE+Y L +S + GH+ A + + S
Sbjct: 347 IPGNRTPTLVTSLQNNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHR-ADVRTLALS 405
Query: 380 PKEDNLLYSTGLDGLVKLWDIRAGGSCV 463
D +L +G +G +KLW+ + SC+
Sbjct: 406 ANHDVIL--SGANGSLKLWN-KKTTSCI 430
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 281 NSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKL 433
NS+ + SD S+HQ R LTQ F+ N + T L+G+V L
Sbjct: 369 NSVNVVSSSDYSVHQSSR------PNLTQRAFTSPTLNTMGRTALNGMVGL 413
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 389 DNLLYSTGLDGLVKLWDI 442
D+ L+S LDG +K WDI
Sbjct: 444 DSRLFSCSLDGTIKQWDI 461
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHK-------EATLTQVVFSPKEDNLLYSTGLD 418
+AI+ +D ++ Y L L R+ G+ + + ++V+ + LYS +
Sbjct: 448 IAIAYNDGNVRFYDLDTQILVSQMRIAGNSAIGNPAVKDRINKIVWKNGNPDRLYSLHEN 507
Query: 419 GLVKLWDIRA 448
G+V+++D+++
Sbjct: 508 GMVRVFDVKS 517
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 299 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 442
K S S+ + +H + ATL +P S+G DG V LW +
Sbjct: 330 KGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGL-DGLV 427
SL+ A + DN EI+ + SL Q R E + Q F + N+L +T L +G+
Sbjct: 335 SLSKAFFIFDNQNEIFNFNSDSLQQQFR---QGEEIVKQSFFQVPDYNILVATLLREGIE 391
Query: 428 KLWD 439
L D
Sbjct: 392 NLKD 395
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 320 HQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRA 448
+ V L+ + + V NLL T DGL K WD R+
Sbjct: 137 NSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRS 179
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.6 bits (56), Expect = 4.5
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +2
Query: 221 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLL 400
S H + S +A++ D I I + + V L GH LT FS L
Sbjct: 532 SITHAIYQHSSDLVAVACDDFGIRIVDVQTRKI--VRELWGHSNR-LTSFDFSDT-GRWL 587
Query: 401 YSTGLDGLVKLWDIRAG 451
+ LDG ++ WD+ G
Sbjct: 588 VTASLDGTIRTWDLPTG 604
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 164 QMFSKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIE 292
+MF + K + +HA+ L SYI + KS+ + + D + E
Sbjct: 285 EMFDRIQKAINDHALRLSRSYIIKHAIKKSVIVQVDNVDQAFE 327
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 230 HRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPK 385
H L T ++L + NS+E SD Q+ L + + V+ SPK
Sbjct: 3 HELSSTPQIDLLNDILKNSVESNVFSDYQKKQIVTLILKSKISTAIVLLSPK 54
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 278 DNSIEIYKL-SDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 451
DN I+I+++ D SL + GH + + FS + L ST D +KLWD G
Sbjct: 288 DNQIKIWEVYHDRSLLRT--FQGHARP-IRDLSFSQDGRSFL-STSFDKTIKLWDTELG 342
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LTQVVFSPKEDNLLYSTGLDGLVKLWDIR 445
LT V + ++ ++ G+DG +K+WD+R
Sbjct: 180 LTAVAIA-QQGTQVFIGGIDGAIKIWDLR 207
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 260 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 439
L S +D ++ ++ + V R H E +T V F P +D S LD ++LW
Sbjct: 269 LLTSSADRTVRLWHPKSTKSLAVFR---HNEI-VTCVAFHPIDDRYFVSGSLDCKIQLWS 324
Query: 440 I 442
I
Sbjct: 325 I 325
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 239 DGTKSLNLAISLSDNSIEIYKLSDS-SLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGL 415
D TK+L A+ D S ++ +S + + R+ + + + + F K D+L+
Sbjct: 120 DETKTL--AVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCA- 175
Query: 416 DGLVKLWDIRAGGSCVL 466
DG++K+WD+ S ++
Sbjct: 176 DGVIKVWDLSTPNSAII 192
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 311 SSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTG 412
S +H+ H K +LT F+P+ +LLY+TG
Sbjct: 711 SGIHRSLGTHITKIRSLTLDKFNPETVDLLYATG 744
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 266 ISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 445
+S+SD+S I + ++ ++ + +T F P N L + G +KL D+R
Sbjct: 204 LSISDHSFNIVDIKPENMEELTEV-------ITSAEFHPINCNHLMYSSSKGNIKLLDLR 256
Query: 446 AGGSC 460
C
Sbjct: 257 QSALC 261
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 392 NLLYSTGLDGLVKLWDIRAGG 454
N+L + G D K+WDIRA G
Sbjct: 313 NILATGGQDTTAKVWDIRALG 333
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 398 LYSTGLDGLVKLWDIRAGGS 457
L S DG VKLWDIR S
Sbjct: 1194 LISASSDGEVKLWDIRMNHS 1213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,349,849
Number of Sequences: 5004
Number of extensions: 71404
Number of successful extensions: 320
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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