Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K07
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0365 - 43071448-43071568,43071673-43072514                       31   1.2  
07_01_0061 - 451093-451377,451501-451596,451714-451824                 29   6.2  

>01_07_0365 - 43071448-43071568,43071673-43072514
          Length = 320

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/68 (36%), Positives = 31/68 (45%)
 Frame = +2

Query: 329 ANTQQDPRSCLWTTATLPVTSETTASKLLPSARGQSLSGALQTSPGSSTRPKDSSLPTDI 508
           +NT    R C+ T+  L     TT    +P+A  QSL G  + SP     P  SS P D 
Sbjct: 121 SNTPPQHRRCM-TSFDLADYHRTTDPVPVPAAAQQSLIGIDEISP-----PPSSSSPDDT 174

Query: 509 LTILTTFK 532
            T L T K
Sbjct: 175 TTQLVTLK 182


>07_01_0061 - 451093-451377,451501-451596,451714-451824
          Length = 163

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 639 GKDPXRXEFRLGPQVCGQFVPGSIV*ALF-TKLTLEILNVVRIVRISVGNDESFGRVDDP 463
           G DP     RLG Q     V    V  ++  +LTL I+N +  +++ V + ++F R D  
Sbjct: 25  GSDPY-VVLRLGKQKVKTSVKKKSVNPIWHEELTLSIMNPIAPIKLGVFDKDTFSRDDPM 83

Query: 462 GD 457
           GD
Sbjct: 84  GD 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,455,464
Number of Sequences: 37544
Number of extensions: 344628
Number of successful extensions: 804
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)