Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K07
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.3  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   5.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.8  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 473 TRPKDSSLPTDILTILTTFKISSVSLVKRAYTMEPGT 583
           T  ++  +  +   +  T  ++ V L  RAY +EPGT
Sbjct: 334 TEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 18/63 (28%), Positives = 24/63 (38%)
 Frame = +3

Query: 162 GMYHLVKIPIGRGLLHHVDYWGEGKVTNLGKIRGFPQSYNVNEQFALVSKGHNKGKQIPN 341
           G  H V      G LH V +W + K  +  +  G P    V   F  V K H +   I  
Sbjct: 105 GSEHTVDGESFAGELHLV-HWNQSKYKSFAEAAGHPDGLAVLGVFLKVGKPHPELDIIAR 163

Query: 342 RIP 350
            +P
Sbjct: 164 LLP 166


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 260 RLPSKLQCKRTVCARQ*GPQ*GKANTQQDPRSCLWTTATLPVTSE 394
           R  ++LQ    +  +Q   Q  +   QQ P+  LWTT      S+
Sbjct: 386 RKQTQLQLSPRLQQQQQQQQQSQQQQQQQPQQLLWTTVVRSCPSQ 430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,930
Number of Sequences: 2352
Number of extensions: 11757
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)