Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_K06
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   4.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 290 GQLSRMGVHLEYHEGER 340
           G+ S +  HL +H GER
Sbjct: 327 GKTSHLKAHLRWHTGER 343


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 303 EWEYTSNITKENEEESIQ 356
           +WEY +N  KEN  + +Q
Sbjct: 144 DWEYPANADKENFVKLLQ 161


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 594 IDRIYFHSCTSRSSQWHS-SIPFQTQFSSKL 505
           +DR+  H+    ++QW+S +I    QF   L
Sbjct: 182 VDRLLSHAPIDSANQWYSQTIDNSYQFCDNL 212


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = -2

Query: 421 CHPYILVSSQAAFS*RESSR*VCIDSSSFSFVIFEVY 311
           CH ++++S+ A     + +   C D  +F  +  ++Y
Sbjct: 597 CHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLY 633


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 594 IDRIYFHSCTSRSSQWHS-SIPFQTQFSSKL 505
           +DR+  H+    ++QW+S +I    QF   L
Sbjct: 173 VDRLLSHAPIDSANQWYSQTIDNSYQFCDNL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,616
Number of Sequences: 336
Number of extensions: 3377
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)